Parental gene: | AP1M2, ENSMODG00000005838 |
| Aliases: | None |
| Description: | adaptor-related protein complex 1, mu 2 subunit [Source:HGNC Symbol;Acc:558] |
| Organism: | Opossum (Monodelphis domestica) |
| Coordinates: | 3:430771475..430781046(+) |
>ENSMODG00000005838
ATGTCTGCCTCTGCGGTCTTCATTCTGGACATGAAGGGGAAGCCCCTGATCTGCCGGAACTACAAGGGGGATGTGAGCAT
GACCGAGATTGACCACTTCATGCCCCTGCTGATGCAGAAGGAAGAAGAGGGAGCCCTGACCCCACTGCTGACCCATGGCA
GGGTGCACTTCCTGTGGATCAAATATAGCAACCTTTACTTGGTGGCCACCACCCTCAAGAATGCCAATGCCTCTCTGGTG
TACTCCTTTCTCTACAAGGCTGTTGAGGTATTCTCTGAGTATTTTAAGGAGCTAGAAGAAGAGAGCATCCGGGACAATTT
CGTCATTGTCTACGAGCTATTGGATGAGCTCATGGATTTTGGCTTTCCACAAACCACAGACAGCAAAATTCTCCAAGAGT
ATATCACCCAGCAGGGCAACAAATTAGAGACAGGCAAGTCCCGGGTGCCCCCAACAGTTACCAATGCTGTGTCTTGGCGT
TCAGAGGGTATCAAATATAAGAAGAATGAGGTTTTCATTGATGTTATTGAGTCTGTCAACCTACTGGTCAATGCCAATGG
GAGTGTGCTGCTGAGTGAGATTGTGGGCACCATTAAACTGAAGGTGTTCTTGTCTGGCATGCCAGAGCTGAGATTGGGAC
TCAATGACCGGGTACTTTTTGAACTCACTGGCCTTTCAGGCAATAAAAACAAGTCTGTTGAATTGGAAGATGTTAAGTTC
CATCAGTGTGTACGACTCTCTAGATTTGACAATGATCGAACCATCTCCTTCATCCCACCTGATGGTGACTTTGAACTTAT
GTCCTATCGGCTCAATACCCAGGTAAAACCACTGATATGGATTGAGTCTGTCATTGAAAAGTTCTCACACAGTCGGGTAG
AAATTATGGTTAAGGCTAAAGGCCAGTTTAAGAAGCAGTCAGTGGCCAACAGTGTGGAGATCGCAGTCCCAGTGCCCAGT
GATGCAGATTCCCCCCGATTCAAAACCAGTGTGGGCAGCGCCAAGTACCTGCCTGAGAAAAATGTGGTTATCTGGAACAT
CAAGTCCTTTCCGGGAGGAAAGGAATACCTAATGAGAGCACACTTTGGCTTGCCCAGCGTTGAGAAAGAGGAAGTGGAGG
GCCGGCCTCCTATCTCTGTCAAATTTGAGATTCCTTATTTTACTGTCTCTGGGATCCAGGTCCGGTACATGAAGATCATT
GAGAAGAGTGGGTACCAAGCTCTTCCTTGGGTTCGATATATCACCCAGAGTGGGGGTAAGAGGGTACTAGGAGGGTAG
ATGTCTGCCTCTGCGGTCTTCATTCTGGACATGAAGGGGAAGCCCCTGATCTGCCGGAACTACAAGGGGGATGTGAGCAT
GACCGAGATTGACCACTTCATGCCCCTGCTGATGCAGAAGGAAGAAGAGGGAGCCCTGACCCCACTGCTGACCCATGGCA
GGGTGCACTTCCTGTGGATCAAATATAGCAACCTTTACTTGGTGGCCACCACCCTCAAGAATGCCAATGCCTCTCTGGTG
TACTCCTTTCTCTACAAGGCTGTTGAGGTATTCTCTGAGTATTTTAAGGAGCTAGAAGAAGAGAGCATCCGGGACAATTT
CGTCATTGTCTACGAGCTATTGGATGAGCTCATGGATTTTGGCTTTCCACAAACCACAGACAGCAAAATTCTCCAAGAGT
ATATCACCCAGCAGGGCAACAAATTAGAGACAGGCAAGTCCCGGGTGCCCCCAACAGTTACCAATGCTGTGTCTTGGCGT
TCAGAGGGTATCAAATATAAGAAGAATGAGGTTTTCATTGATGTTATTGAGTCTGTCAACCTACTGGTCAATGCCAATGG
GAGTGTGCTGCTGAGTGAGATTGTGGGCACCATTAAACTGAAGGTGTTCTTGTCTGGCATGCCAGAGCTGAGATTGGGAC
TCAATGACCGGGTACTTTTTGAACTCACTGGCCTTTCAGGCAATAAAAACAAGTCTGTTGAATTGGAAGATGTTAAGTTC
CATCAGTGTGTACGACTCTCTAGATTTGACAATGATCGAACCATCTCCTTCATCCCACCTGATGGTGACTTTGAACTTAT
GTCCTATCGGCTCAATACCCAGGTAAAACCACTGATATGGATTGAGTCTGTCATTGAAAAGTTCTCACACAGTCGGGTAG
AAATTATGGTTAAGGCTAAAGGCCAGTTTAAGAAGCAGTCAGTGGCCAACAGTGTGGAGATCGCAGTCCCAGTGCCCAGT
GATGCAGATTCCCCCCGATTCAAAACCAGTGTGGGCAGCGCCAAGTACCTGCCTGAGAAAAATGTGGTTATCTGGAACAT
CAAGTCCTTTCCGGGAGGAAAGGAATACCTAATGAGAGCACACTTTGGCTTGCCCAGCGTTGAGAAAGAGGAAGTGGAGG
GCCGGCCTCCTATCTCTGTCAAATTTGAGATTCCTTATTTTACTGTCTCTGGGATCCAGGTCCGGTACATGAAGATCATT
GAGAAGAGTGGGTACCAAGCTCTTCCTTGGGTTCGATATATCACCCAGAGTGGGGGTAAGAGGGTACTAGGAGGGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 0 .00 RPM |
| SRP007412_cerebellum | 0 .00 RPM |
| SRP007412_heart | 0 .00 RPM |
| SRP007412_kidney | 0 .00 RPM |
| SRP007412_liver | 0 .00 RPM |
| SRP007412_testis | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Macropus eugenii | ENSMEUG00000003643 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000000660 | within_species_paralog | 1 retrogene | |
| Ornithorhynchus anatinus | ENSOANG00000010455 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000024334 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mdom_451 | 85.98 | 77.18 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mdom_1571 | 86.24 | 95.06 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMODG00000005838 retrocopies