Parental gene: | SF3A1, ENSMODG00000009270 |
| Aliases: | None |
| Description: | splicing factor 3a, subunit 1, 120kDa [Source:HGNC Symbol;Acc:10765] |
| Organism: | Opossum (Monodelphis domestica) |
| Coordinates: | 3:519408102..519430225(-) |
>ENSMODG00000009270
ATGCCGGCAGGACCGGTGCAGGCGGTGCCACCGCCGCCGCCAGTCGCCACAGAACCCAAGCAGCCCTCAGAAGAAGAAGC
TTCCAAGGAAGATTCAACCCCTTCCAAGCCAGTTGTGGGAATCATCTACCCGCCTCCTGAGGTTAGGAATATAGTGGATA
AGACCGCCAGCTTTGTGGCCAGAAATGGCCCTGAATTTGAAGCTCGAATTCGACAAAATGAAATCAACAATCCCAAATTC
AACTTCCTCAACCCTAATGACCCGTACCATGCCTACTACCGGCACAAAGTTAGTGAATTCAAGGAAGGGAAGGCACAGGA
GCCCTCGGCCGCCATCCCCAAGGTCATGCAGCAGCAGCAACAGGCCTCCCAGCAGCAGCTGCCCCAGAAGGTCCAAGCCC
AGGTGATCCAGGAGACCATCGTGCCCAAGGAGCCCCCTCCAGAGTTTGAGTTCATTGCCGACCCCCCCTCCATCTCAGCC
TTTGACCTGGATGTGGTGAAGCTGACTGCTCAGTTTGTGGCCCGCAATGGGCGCCAGTTCCTGACCCAGCTGATGCAGAA
GGAGCAGCGGAACTACCAGTTTGACTTTCTACGTCCCCAGCACAGTCTCTTCAACTACTTCACCAAGCTGGTGGAACAGT
ATACCAAGATCCTGATTCCACCAAAAGGCTTATTTACGAAACTCAAGAAGGAGGCAGAGAACCCCAGAGAAGTTCTGGAT
CAGGTGTGTTACCGTGTGGAGTGGGCCAAGTTCCAGGAGCGCGAGAGGAAGAAGGAGGAGGAGGAGAAAGAGAAGGAACG
GGTGGCCTACGCACAGATTGACTGGCACGACTTTGTGGTGGTGGAGACGGTGGACTTCCAGCCCAATGAACAAGGAAACT
TCCCACCACCTACCACGCCGGAGGAGCTGGGCGCCCGAATCCTGATCCAGGAGCGTTATGAGAAGTTTGGGGAGAGTGAG
GAAGTGGAAATGGAGGTGGAGTCGGATGATGAAGACGAGAAGCAGGAGAAGACCGAGGAACCCCCATCCCAGCTGGACCA
GGACACCCAAGTGCAGGACATGGACGAGGGTTCTGATGATGAAGAGGAGAGCCAGAAAGTTCCTCCTCCTCCAGAGACAC
CCATGCCTCCACCACTGCCACCCACCCCCGATCAGGTCATCGTCCGCAAGGACTATGACCCCAAAGCTTCCAAGCCCCTG
CCCCCAGCCCCAGCTCCAGATGAGTATCTCGTGTCCCCCATCACCGGGGAGAAGATCCCAGCCAGCAAGATGCAAGAACA
CATGCGCATTGGCCTGCTGGACCCGCGCTGGCTGGAGCAGCGGGATCGCTCAATCCGCGAGAAGCAGAGTGACGACGAGG
TCTATGCCCCAGGGCTGGATATCGAGAGCAGCCTGAAGCAGCTGGCCGAGCGGCGTACCGACATCTTCGGTGTGGAGGAG
ACGGCCATCGGCAAGAAGATCGGCGAGGAGGAGATCCAGAAGCCTGAGGAGAAGGTGACCTGGGATGGCCACTCTGGCAG
CATGGCCCGGACCCAGCAGGCAGCCCAGGCCAACATCACTCTCCAGGAGCAGATCGAAGCCATCCACAAGGCCAAGGGGC
TGGTGCCAGAAGACGACAGCAAGGAGAAGATCGGCCCCAGCAAGCCCAACGAGATCCCACAGCCGCCCCCTCCGTCCTCA
GCCCCCAACATCCCCACCTCGGCCCCTCCCATCACGTCTGTGCCCCGGCCACCCTCGATGCCACCTCCGGTCCGAACCAC
AGTTGTCTCTGCCGTACCCGTCATGCCACGTCCCCCCATGGCCTCCGTGGTCCGCCTGCCTCCTGGCTCCGTGATTGCCC
CTATGCCTCCCATCATCCATGCTCCTCGCATCAATGTGGTGCCCATGCCACCCTCTGCTCCACCCATCATGGCACCGCGT
CCACCTCCCATGATTGTGCCAACAGCATTTGTACCGGCCCCTCCTGTGGCTCCGGTCCCAGCACCCACCCCGATGCCTCC
TGTCCACCCCCCACCACCCATGGAGGATGAGCCTGCTTCTAAGAAGCTGAAAACAGAAGACAGCCTCATGCCAGAGGAAG
AGTTTCTCCGGAGGAACAAGGGTCCAGTCACCATCAAGGTCCAGGTCCCGAACATGCAGGACAAGACTGAATGGAAACTG
AACGGGCAGGTGCTGGTCTTCACCCTCCCGCTGCCAGACCAGGTCTCCGTCATCAAGGTTAAGATCCACGAGGCCACCGG
CATGCCTGCTGGCAAACAAAAGCTGCAGTATGAGGGCATCTTCATCAAAGACTCCAACTCCCTGGCATATTACAACATGG
CGAATGGTGCTGTGATCCACCTGGCACTCAAGGAAAGAGGCGGGAGGAAGAAATAG
ATGCCGGCAGGACCGGTGCAGGCGGTGCCACCGCCGCCGCCAGTCGCCACAGAACCCAAGCAGCCCTCAGAAGAAGAAGC
TTCCAAGGAAGATTCAACCCCTTCCAAGCCAGTTGTGGGAATCATCTACCCGCCTCCTGAGGTTAGGAATATAGTGGATA
AGACCGCCAGCTTTGTGGCCAGAAATGGCCCTGAATTTGAAGCTCGAATTCGACAAAATGAAATCAACAATCCCAAATTC
AACTTCCTCAACCCTAATGACCCGTACCATGCCTACTACCGGCACAAAGTTAGTGAATTCAAGGAAGGGAAGGCACAGGA
GCCCTCGGCCGCCATCCCCAAGGTCATGCAGCAGCAGCAACAGGCCTCCCAGCAGCAGCTGCCCCAGAAGGTCCAAGCCC
AGGTGATCCAGGAGACCATCGTGCCCAAGGAGCCCCCTCCAGAGTTTGAGTTCATTGCCGACCCCCCCTCCATCTCAGCC
TTTGACCTGGATGTGGTGAAGCTGACTGCTCAGTTTGTGGCCCGCAATGGGCGCCAGTTCCTGACCCAGCTGATGCAGAA
GGAGCAGCGGAACTACCAGTTTGACTTTCTACGTCCCCAGCACAGTCTCTTCAACTACTTCACCAAGCTGGTGGAACAGT
ATACCAAGATCCTGATTCCACCAAAAGGCTTATTTACGAAACTCAAGAAGGAGGCAGAGAACCCCAGAGAAGTTCTGGAT
CAGGTGTGTTACCGTGTGGAGTGGGCCAAGTTCCAGGAGCGCGAGAGGAAGAAGGAGGAGGAGGAGAAAGAGAAGGAACG
GGTGGCCTACGCACAGATTGACTGGCACGACTTTGTGGTGGTGGAGACGGTGGACTTCCAGCCCAATGAACAAGGAAACT
TCCCACCACCTACCACGCCGGAGGAGCTGGGCGCCCGAATCCTGATCCAGGAGCGTTATGAGAAGTTTGGGGAGAGTGAG
GAAGTGGAAATGGAGGTGGAGTCGGATGATGAAGACGAGAAGCAGGAGAAGACCGAGGAACCCCCATCCCAGCTGGACCA
GGACACCCAAGTGCAGGACATGGACGAGGGTTCTGATGATGAAGAGGAGAGCCAGAAAGTTCCTCCTCCTCCAGAGACAC
CCATGCCTCCACCACTGCCACCCACCCCCGATCAGGTCATCGTCCGCAAGGACTATGACCCCAAAGCTTCCAAGCCCCTG
CCCCCAGCCCCAGCTCCAGATGAGTATCTCGTGTCCCCCATCACCGGGGAGAAGATCCCAGCCAGCAAGATGCAAGAACA
CATGCGCATTGGCCTGCTGGACCCGCGCTGGCTGGAGCAGCGGGATCGCTCAATCCGCGAGAAGCAGAGTGACGACGAGG
TCTATGCCCCAGGGCTGGATATCGAGAGCAGCCTGAAGCAGCTGGCCGAGCGGCGTACCGACATCTTCGGTGTGGAGGAG
ACGGCCATCGGCAAGAAGATCGGCGAGGAGGAGATCCAGAAGCCTGAGGAGAAGGTGACCTGGGATGGCCACTCTGGCAG
CATGGCCCGGACCCAGCAGGCAGCCCAGGCCAACATCACTCTCCAGGAGCAGATCGAAGCCATCCACAAGGCCAAGGGGC
TGGTGCCAGAAGACGACAGCAAGGAGAAGATCGGCCCCAGCAAGCCCAACGAGATCCCACAGCCGCCCCCTCCGTCCTCA
GCCCCCAACATCCCCACCTCGGCCCCTCCCATCACGTCTGTGCCCCGGCCACCCTCGATGCCACCTCCGGTCCGAACCAC
AGTTGTCTCTGCCGTACCCGTCATGCCACGTCCCCCCATGGCCTCCGTGGTCCGCCTGCCTCCTGGCTCCGTGATTGCCC
CTATGCCTCCCATCATCCATGCTCCTCGCATCAATGTGGTGCCCATGCCACCCTCTGCTCCACCCATCATGGCACCGCGT
CCACCTCCCATGATTGTGCCAACAGCATTTGTACCGGCCCCTCCTGTGGCTCCGGTCCCAGCACCCACCCCGATGCCTCC
TGTCCACCCCCCACCACCCATGGAGGATGAGCCTGCTTCTAAGAAGCTGAAAACAGAAGACAGCCTCATGCCAGAGGAAG
AGTTTCTCCGGAGGAACAAGGGTCCAGTCACCATCAAGGTCCAGGTCCCGAACATGCAGGACAAGACTGAATGGAAACTG
AACGGGCAGGTGCTGGTCTTCACCCTCCCGCTGCCAGACCAGGTCTCCGTCATCAAGGTTAAGATCCACGAGGCCACCGG
CATGCCTGCTGGCAAACAAAAGCTGCAGTATGAGGGCATCTTCATCAAAGACTCCAACTCCCTGGCATATTACAACATGG
CGAATGGTGCTGTGATCCACCTGGCACTCAAGGAAAGAGGCGGGAGGAAGAAATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 0 .00 RPM |
| SRP007412_cerebellum | 0 .00 RPM |
| SRP007412_heart | 0 .00 RPM |
| SRP007412_kidney | 0 .00 RPM |
| SRP007412_liver | 0 .00 RPM |
| SRP007412_testis | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Otolemur garnettii | ENSOGAG00000012931 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mdom_1115 | 80.55 | 50.44 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMODG00000009270 retrocopies