Parental gene: | HSPH1, ENSMODG00000009347 |
| Aliases: | None |
| Description: | heat shock 105kDa/110kDa protein 1 [Source:HGNC Symbol;Acc:16969] |
| Organism: | Opossum (Monodelphis domestica) |
| Coordinates: | 4:302643358..302674417(-) |
>ENSMODG00000009347
ATGTCAGTGGTGGGACTGGACTTAAGCTCTCATAGCTGCTATATTGCTATACTAAATTGTGGAGCATCAATTTGGAGCCT
ATATTTACAGTTAGATGATTATCTCCAATCAGTCATATCATTTGGATCAAAAAACAGAACAATTGGAGTTGCTGCTAAAA
ATCAGCAAATAACTCATGCAAACAACACAGTATCGAACTTCAAGAGATTTCATGGCCGAGCATTTAACGACCCTTTTGTT
CAAAAAGAAAAAGAAAATTTGAGTTTTGAGTTGGTTCCCATGAAAAATGGAGGTGTTGGAATAAAGGTAATGTACATGGA
TGAAGAACATTACTTTAGTGTAGAACAAATAACTGCAATGCTGCTAACCAAGTTAAAGGAAACTGCTGAGAACAACCTCA
AAAAACCAGTAACAGACTGTGTTATTTCAGTTCCATCATTCTTCACAGATGCTGAAAGGAGGTCTGTATTGGATGCTGCT
CAAATTGTTGGCTTAAATTGCTTAAGACTAATGAATGATATGACAGCAGTTGCTTTGAATTATGGGATTTATAAGCAAGA
CCTTCCAGGCCCAGAAGAAAACCCACGGATTGTGGTCTTTGTTGATATGGGACACTCAGCTTTCCAAGTGTCTGCCTGTG
CTTTCAATAAGGGTAAATTAAAGGTTTTAGGAACAGCTTTCGATCCTTTCTTGGGAGGAAGAAATTTTGATGAAAAACTA
GTGGAGCACTTCTGTGCAGAAATTAAAGCTAAATACAAATTAGATGCAAAATCTAAAATTCGAGCACTCCTACGCCTCTA
TCAAGAATGTGAGAAACTGAAAAAGCTGATGAGCTCTAATAGCATGGACCTCCCACTGAATATTGAGTGCTTTATGAATG
ACATAGATATCTCCGGGAAGATGAACAGATCTCAGTTTGAAGAGCTATGTGCTGATCTCCTGCAAAAGATAGATAAGCCC
CTTAAATCATTAATGGAACAAACCCAACTCCAAGTAGAAGATGTGAGTGCTGTGGAGATTGTTGGAGGCACCACACGAAT
TCCTGCAGTGAAAGAAAAGATTGCCAAATTTTTTGGGAAAGACATCAGCACCACACTAAATGCGGATGAAGCTGTAGCCA
GAGGTTGTGCCCTGCAGTGTGCCATCCTGTCCCCAGCATTTAAAGTACGAGAGTTTTCAGTCACAGATGCAGTTCCTTTC
CCAATTTCTTTAGTCTGGAACAATGACTCAGAAGGTGCTGAAGGTGTTCATGAAGTATTCAGCAGGAACCATGCTGCTCC
CTTCTCCAAAGTTCTCACTTTTTATAGGAAAGGTCCCTTTGAGTTAGAAGCTTTTTACTCTGATCCTGAAGGCTTTCCAT
ACCCAGAAGCAAAAATTGGCCGCTTTGTAGTCCAAAATGTTTCAGCTCAGAAAGATGGCGAGAAATCTAAAGTAAAAGTT
AAAGTACGGGTCAACACTCATGGCATTTTTACAATATCTACTGCATCAATGGTGGAGAAAATCCCAACAGAAGAAAGTGA
GGGTTCCTCCATTGAAACAGATATGGAGCATCAGAGCCGACCCCCACCTGAAACCACAGACGTGGATAAAAATATCCAGC
AAGACAACAGTGAAGCTGGAACACAGCCCCAGGTACAAACTGATGGTCAACAAACTCCACAGTGTCCCCCTTCACCTGAC
CTTCCCTCTGAAGAAAACAAAATCCCTGATGCTGACAAAGCAAATGAAAAGAAAGGAGATCAACCTCCAGAAGCTAAAAA
ACCCAAAATAAAGGTGGTGAATGTTGAACTTCCCATTGAAGCAAACTTGGTCTGGCAATTGGGAAAAGACCTTCTCAATA
TGTATATTGAGACAGAAGGCAAAATGATCATGCAAGACAAGCTAGAGAAAGAAAGGAATGATGCCAAAAATGCAGTTGAA
GAATATGTCTATGAATTCAGGGATAAGCTATCTGGGCCTTATGAAAAGTTTGTATGTGAACAGGATCATCAAAATTTCCT
GAAACTCTTAACAGAAACTGAAGATTGGCTATATGAGGAGGGAGAGGACCAAGCCAAACAAGCATATGTTGACAAGTTGG
ACCAGTTAATGAAATTGGGCACTCCCATTAAGATTAGGTTTCAAGAAGCTGAGGAACGACCAAGAATGTTTGAAGAGTTG
GGACTAAAGCTGCAACACTATGCAAAAATAGCTGGCGACTACAGGAATAAAGATGAGAGATACATCCATATCGATGAATC
CGAAATGAAGAAAGTTGAAAAGTCTGTCAATGAAACAATGGAGTGGATGAATAATGTCATGAATGCCCAAGCTAAAAGAA
GCCTTGATCAGGATCCAGTTGTATGTGGCAATGAAATTAAAATGAAGGTGGAGGAATTAATCCATGTTTGTGAACCAGTT
GTGACACAACCGAAACCAAAAGTAGAATCTCCCAAGCAGGAAAAAACACTCAATGGCCCCAATGTGGAGAAGAATGAAGG
TTTTGAAGTAAAAAATAACCCTAATGCTGAGGGCCTGCATCAGAATGGAGACTGTCACCCCAGTGAGAACAGCAGCATTC
ATATGGATTTGGACTAA
ATGTCAGTGGTGGGACTGGACTTAAGCTCTCATAGCTGCTATATTGCTATACTAAATTGTGGAGCATCAATTTGGAGCCT
ATATTTACAGTTAGATGATTATCTCCAATCAGTCATATCATTTGGATCAAAAAACAGAACAATTGGAGTTGCTGCTAAAA
ATCAGCAAATAACTCATGCAAACAACACAGTATCGAACTTCAAGAGATTTCATGGCCGAGCATTTAACGACCCTTTTGTT
CAAAAAGAAAAAGAAAATTTGAGTTTTGAGTTGGTTCCCATGAAAAATGGAGGTGTTGGAATAAAGGTAATGTACATGGA
TGAAGAACATTACTTTAGTGTAGAACAAATAACTGCAATGCTGCTAACCAAGTTAAAGGAAACTGCTGAGAACAACCTCA
AAAAACCAGTAACAGACTGTGTTATTTCAGTTCCATCATTCTTCACAGATGCTGAAAGGAGGTCTGTATTGGATGCTGCT
CAAATTGTTGGCTTAAATTGCTTAAGACTAATGAATGATATGACAGCAGTTGCTTTGAATTATGGGATTTATAAGCAAGA
CCTTCCAGGCCCAGAAGAAAACCCACGGATTGTGGTCTTTGTTGATATGGGACACTCAGCTTTCCAAGTGTCTGCCTGTG
CTTTCAATAAGGGTAAATTAAAGGTTTTAGGAACAGCTTTCGATCCTTTCTTGGGAGGAAGAAATTTTGATGAAAAACTA
GTGGAGCACTTCTGTGCAGAAATTAAAGCTAAATACAAATTAGATGCAAAATCTAAAATTCGAGCACTCCTACGCCTCTA
TCAAGAATGTGAGAAACTGAAAAAGCTGATGAGCTCTAATAGCATGGACCTCCCACTGAATATTGAGTGCTTTATGAATG
ACATAGATATCTCCGGGAAGATGAACAGATCTCAGTTTGAAGAGCTATGTGCTGATCTCCTGCAAAAGATAGATAAGCCC
CTTAAATCATTAATGGAACAAACCCAACTCCAAGTAGAAGATGTGAGTGCTGTGGAGATTGTTGGAGGCACCACACGAAT
TCCTGCAGTGAAAGAAAAGATTGCCAAATTTTTTGGGAAAGACATCAGCACCACACTAAATGCGGATGAAGCTGTAGCCA
GAGGTTGTGCCCTGCAGTGTGCCATCCTGTCCCCAGCATTTAAAGTACGAGAGTTTTCAGTCACAGATGCAGTTCCTTTC
CCAATTTCTTTAGTCTGGAACAATGACTCAGAAGGTGCTGAAGGTGTTCATGAAGTATTCAGCAGGAACCATGCTGCTCC
CTTCTCCAAAGTTCTCACTTTTTATAGGAAAGGTCCCTTTGAGTTAGAAGCTTTTTACTCTGATCCTGAAGGCTTTCCAT
ACCCAGAAGCAAAAATTGGCCGCTTTGTAGTCCAAAATGTTTCAGCTCAGAAAGATGGCGAGAAATCTAAAGTAAAAGTT
AAAGTACGGGTCAACACTCATGGCATTTTTACAATATCTACTGCATCAATGGTGGAGAAAATCCCAACAGAAGAAAGTGA
GGGTTCCTCCATTGAAACAGATATGGAGCATCAGAGCCGACCCCCACCTGAAACCACAGACGTGGATAAAAATATCCAGC
AAGACAACAGTGAAGCTGGAACACAGCCCCAGGTACAAACTGATGGTCAACAAACTCCACAGTGTCCCCCTTCACCTGAC
CTTCCCTCTGAAGAAAACAAAATCCCTGATGCTGACAAAGCAAATGAAAAGAAAGGAGATCAACCTCCAGAAGCTAAAAA
ACCCAAAATAAAGGTGGTGAATGTTGAACTTCCCATTGAAGCAAACTTGGTCTGGCAATTGGGAAAAGACCTTCTCAATA
TGTATATTGAGACAGAAGGCAAAATGATCATGCAAGACAAGCTAGAGAAAGAAAGGAATGATGCCAAAAATGCAGTTGAA
GAATATGTCTATGAATTCAGGGATAAGCTATCTGGGCCTTATGAAAAGTTTGTATGTGAACAGGATCATCAAAATTTCCT
GAAACTCTTAACAGAAACTGAAGATTGGCTATATGAGGAGGGAGAGGACCAAGCCAAACAAGCATATGTTGACAAGTTGG
ACCAGTTAATGAAATTGGGCACTCCCATTAAGATTAGGTTTCAAGAAGCTGAGGAACGACCAAGAATGTTTGAAGAGTTG
GGACTAAAGCTGCAACACTATGCAAAAATAGCTGGCGACTACAGGAATAAAGATGAGAGATACATCCATATCGATGAATC
CGAAATGAAGAAAGTTGAAAAGTCTGTCAATGAAACAATGGAGTGGATGAATAATGTCATGAATGCCCAAGCTAAAAGAA
GCCTTGATCAGGATCCAGTTGTATGTGGCAATGAAATTAAAATGAAGGTGGAGGAATTAATCCATGTTTGTGAACCAGTT
GTGACACAACCGAAACCAAAAGTAGAATCTCCCAAGCAGGAAAAAACACTCAATGGCCCCAATGTGGAGAAGAATGAAGG
TTTTGAAGTAAAAAATAACCCTAATGCTGAGGGCCTGCATCAGAATGGAGACTGTCACCCCAGTGAGAACAGCAGCATTC
ATATGGATTTGGACTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 0 .00 RPM |
| SRP007412_cerebellum | 0 .00 RPM |
| SRP007412_heart | 0 .00 RPM |
| SRP007412_kidney | 0 .00 RPM |
| SRP007412_liver | 0 .00 RPM |
| SRP007412_testis | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000013998 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mdom_1049 | 93.06 | 54.95 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMODG00000009347 retrocopies