Parental gene: | REXO4, ENSMODG00000012817 |
| Aliases: | None |
| Description: | REX4, RNA exonuclease 4 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:12820] |
| Organism: | Opossum (Monodelphis domestica) |
| Coordinates: | 1:460705190..460718384(-) |
>ENSMODG00000012817
ATGAAAGTGAAGGCCGGGCTCTCTAAACCTTCTAAGGGCAGCGTGGTGGCCAGGCCGGAGTTTGTCAAGAAGTCCGATCG
GAAAAAACAAAAGAAGAAGAAGAAATTCTGGAAAAAATATCCCCAGGCGGCAACTGAAGCTTCCAAGAACCCGGAGTGTA
AGGATGCGAGAGCCGCGGCGGCGCTGCCCCCCAAGGGGCCGCAAGAATTTTCTCACAACTGGAAGGCCCTGCAGGAGCTA
TTGAAACAGAAAACACTGGTTCCAGAAAATTCCCTTCCTGTCTTTCAAGGAAATTCCAGAAAACAGCCCAAAGACCACCA
CCAGAATGGCAAACATGTTCTTAAAAAGGAAGAGTATGGTGATACAGAACTACCAGAGCTGCCAGGCAAAATAGGCCAAC
CCTCCTCCAAGGCCCTTATTTCTTTAGGGTCTCTGAATGACACAAAAGTTGCCTCTCATAAAAAATGCAGTGAAACAAAG
GGCAAAGGCAGTGGAACAGATACCAAGAAAAGAAAAAATGGCAGCCTTCACCAGAAAATAGTGGACATCAAGCGTGAGAA
GAGGAAAGCAGAATTAGTTCCTCCTCCACCAACAGAAGCAGACATCTGGTTTGATGATGTAGATCCTAAGGATATTGAAG
CTGCCATTGGTCCAGAAGCTGCTGAAATAGCCCGAAAAAAACTGGGTCTGAAGGAAACAAATCTGTCACTGGTGAAAGAA
AGAGCATTTGAAGGCATGACCAAAGCTGTAGCAATGGACTGTGAGATGGTAGGAGCAGGGCCAAATGGGGAAGAAAACAT
CCTTGCCCGAGTATCCATTGTGAACCAATTTGGAAAGTGTGTTTATGACAAGTATGTCAAGCCAACAGAGAAAGTGACTG
ATTACCGGACAGATGTCAGTGGAATTCGACCAGAGGACATCAAACACGGAGAAAAGTTCAAAGTTGTTCAAAAGGAAGTG
GCAGATCTGCTTAAGGACAGGATTCTAGTTGGACACGCCCTGCATAATGACTTAAAGATTCTCCTTCTTGATCATCCCAA
AAAGAAGATCCGGGATACACAGAAATATAAACCTTTCAGGACACAAGTAAAGACTGGAAGACCATCTCTGAAATTGCTCA
GTCAGAAAATTCTTGGTATCAGAATACAGCAGTCAGAGCACTGTTCGATTCAAGATGCCCAGGCAGCAATGAGACTTTAC
GTAATGGTTAAAAAACAGTGGGAAGGAACCATCAAAGACAAATATAAACTACAAAGAGAAAAAAATGGCAAAGCATAA
ATGAAAGTGAAGGCCGGGCTCTCTAAACCTTCTAAGGGCAGCGTGGTGGCCAGGCCGGAGTTTGTCAAGAAGTCCGATCG
GAAAAAACAAAAGAAGAAGAAGAAATTCTGGAAAAAATATCCCCAGGCGGCAACTGAAGCTTCCAAGAACCCGGAGTGTA
AGGATGCGAGAGCCGCGGCGGCGCTGCCCCCCAAGGGGCCGCAAGAATTTTCTCACAACTGGAAGGCCCTGCAGGAGCTA
TTGAAACAGAAAACACTGGTTCCAGAAAATTCCCTTCCTGTCTTTCAAGGAAATTCCAGAAAACAGCCCAAAGACCACCA
CCAGAATGGCAAACATGTTCTTAAAAAGGAAGAGTATGGTGATACAGAACTACCAGAGCTGCCAGGCAAAATAGGCCAAC
CCTCCTCCAAGGCCCTTATTTCTTTAGGGTCTCTGAATGACACAAAAGTTGCCTCTCATAAAAAATGCAGTGAAACAAAG
GGCAAAGGCAGTGGAACAGATACCAAGAAAAGAAAAAATGGCAGCCTTCACCAGAAAATAGTGGACATCAAGCGTGAGAA
GAGGAAAGCAGAATTAGTTCCTCCTCCACCAACAGAAGCAGACATCTGGTTTGATGATGTAGATCCTAAGGATATTGAAG
CTGCCATTGGTCCAGAAGCTGCTGAAATAGCCCGAAAAAAACTGGGTCTGAAGGAAACAAATCTGTCACTGGTGAAAGAA
AGAGCATTTGAAGGCATGACCAAAGCTGTAGCAATGGACTGTGAGATGGTAGGAGCAGGGCCAAATGGGGAAGAAAACAT
CCTTGCCCGAGTATCCATTGTGAACCAATTTGGAAAGTGTGTTTATGACAAGTATGTCAAGCCAACAGAGAAAGTGACTG
ATTACCGGACAGATGTCAGTGGAATTCGACCAGAGGACATCAAACACGGAGAAAAGTTCAAAGTTGTTCAAAAGGAAGTG
GCAGATCTGCTTAAGGACAGGATTCTAGTTGGACACGCCCTGCATAATGACTTAAAGATTCTCCTTCTTGATCATCCCAA
AAAGAAGATCCGGGATACACAGAAATATAAACCTTTCAGGACACAAGTAAAGACTGGAAGACCATCTCTGAAATTGCTCA
GTCAGAAAATTCTTGGTATCAGAATACAGCAGTCAGAGCACTGTTCGATTCAAGATGCCCAGGCAGCAATGAGACTTTAC
GTAATGGTTAAAAAACAGTGGGAAGGAACCATCAAAGACAAATATAAACTACAAAGAGAAAAAAATGGCAAAGCATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 49 .94 RPM |
| SRP007412_cerebellum | 60 .07 RPM |
| SRP007412_heart | 27 .51 RPM |
| SRP007412_kidney | 56 .62 RPM |
| SRP007412_liver | 48 .33 RPM |
| SRP007412_testis | 62 .66 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Mus musculus | ENSMUSG00000052406 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000013130 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000019735 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mdom_1839 | 79.50 | 55.76 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMODG00000012817 retrocopies