Parental gene:

EIF5, ENSMODG00000013424

Aliases:None
Description:eukaryotic translation initiation factor 5 [Source:HGNC Symbol;Acc:3299]
Organism:Opossum (Monodelphis domestica)
Coordinates:1:312866899..312872636(-)


>ENSMODG00000013424
ATGTCTGTCAACGTCAACCGCAGTGTTTCAGATCAGTTCTATCGCTACAAAATGCCCCGTCTGATTGCTAAGGTTGAGGG
CAAAGGAAATGGAATTAAGACAGTTATAGTCAACATGGTTGACGTTGCAAAGGCGCTTAATCGGCCTCCAACGTATCCTA
CCAAATATTTTGGTTGTGAGCTGGGAGCACAGACCCAGTTTGATGTTAAGAATGACCGTTACATTGTCAATGGATCTCAT
GAGGCGAATAAGCTGCAAGACATGTTGGATGGATTCATTAAAAAATTTGTTCTCTGTCCCGAGTGTGAGAATCCTGAAAC
TGATCTGCATGTCAATCCTAAGAAACAAACAATAGGTAACTCTTGCAAAGCCTGTGGCTATCGAGGCATGCTTGACACAA
ACCATAAACTCTGCACATTCATTCTCAAGAACCCACCTGAGAATAGTGACAGTGTTACGGGAAAAAAAGAAAAAGAAAAG
AAAAATAGAAAGGGCAAAGACAAAGAAAATGGTTCTGTGTCCAGCAATGAGACAACACCACCACCACCACCACCCAATGA
ACTTAACCCTCCACATGCTGTGGAAGATGATGAGGATGAAGATTGGGGAGAGGATACAACTGAAGAAGCTCAAAGGCGCA
GAATGGATGAAATTAGTGATCATGCAAAAGTTCTGACACTTAGTGACGACCTAGAAAGGACAGTTGAAGAAAGAGTCAAT
ATTTTATTTGACTTTGTGAAGAAAAAGAAAGAAGAAGGTATTATTGATACTTCTGACAAAGAAATTGTTGCAGAAGCAGA
AAGACTGGACGTAAAAGCTATGGGCCCTCTTGTGTTGACTGAGGTTCTTTTTAATGAGAAGATTCGAGAACAAATTAAGA
AGTATAGACGTCATTTTCTACGATTCTGCCACAATAACAAAAAAGCTCAGAGGTACCTTCTTCATGGTTTGGAGTGTGTG
GTAGCTATGCATCAAGCTCAGCTCATCTCCAAAATTCCACATATCTTGAAGGAAATGTATGATGCAGACCTTTTGGAAGA
AGAGGTCATCATTAGCTGGTCAGAAAAGGCCTCTAAGAAATACGTCTCAAAGGAACTTGCCAAAGAGATTCGTGTCAAAG
CAGAGCCCTTTATAAAATGGCTAAAGGAAGCAGAAGAAGAGTCTTCTGGTGGGGAAGAGGAAGATGAAGATGAAAATATT
GAGGTGGTGTATTCTAAGACTGCCAGCGTACCTAAAGTTGAAACTGTGAAGTCAGCTGATAACAAGGATGATGACATTGA
TATTGATGCCATTTAA

Library Parental gene expression (RPM)
SRP007412_brain 650 .10 RPM
SRP007412_cerebellum 848 .13 RPM
SRP007412_heart 328 .73 RPM
SRP007412_kidney 701 .87 RPM
SRP007412_liver 684 .24 RPM
SRP007412_testis 2503 .94 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000001236 ortholog_one2many 1 retrogene
retro_cpor_577,
Erinaceus europaeus ENSEEUG00000015883 ortholog_one2one 1 retrogene
retro_eeur_288,
Echinops telfairi ENSETEG00000015220 ortholog_one2one 2 retrogenes
retro_etel_1843, retro_etel_991,
Homo sapiens ENSG00000100664 ortholog_one2one 1 retrogene
retro_hsap_4782,
Nomascus leucogenys ENSNLEG00000016105 ortholog_one2one 1 retrogene
retro_nleu_1102,
Pongo abelii ENSPPYG00000006169 ortholog_one2one 1 retrogene
retro_pabe_3722,
Pan troglodytes ENSPTRG00000006753 ortholog_one2one 1 retrogene
retro_ptro_3183,
Rattus norvegicus ENSRNOG00000010218 ortholog_one2many 2 retrogenes
retro_rnor_1781, retro_rnor_2459,
Tursiops truncatus ENSTTRG00000002384 ortholog_one2one 1 retrogene
retro_ttru_400,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_2000 90.49 60.56
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSMODG00000013424 retrocopies