Parental gene: | PSMC3, ENSMODG00000019911 |
| Aliases: | None |
| Description: | proteasome (prosome, macropain) 26S subunit, ATPase, 3 [Source:HGNC Symbol;Acc:9549] |
| Organism: | Opossum (Monodelphis domestica) |
| Coordinates: | 5:284351233..284365586(-) |
>ENSMODG00000019911
ATGCGTAGAGGAGACGGAGCTGTACTGTGGCCTTTGCGGGGAGTCCATCGGGGAGAGGAACAATCGGCTGCAGGCCCTGC
CGTGCTCCCACTTCTTCCACCTCAGCAAGATGGCATTGGAGAGGAAGTGCTTAAAATGTCCACAGAGGAGATTATTCAAC
GCACTCGTCTACTGGATAGTGAGATCAAGATCATGAAGAGTGAAGTGTTACGTGTGACACATGAGCTGCAGGCAATGAAG
GACAAGATCAAAGAGAACAGTGAGAAGATCAAAGTGAACAAGACGCTGCCCTACCTGGTGTCCAACGTTATCGAGCTGCT
AGATGTTGACCCCAATGACCAAGAAGAAGATGGTGCAAACATTGACCTTGACTCCCAGAGGAAAGGCAAATGCGCTGTGA
TCAAAACCTCTACCCGACAGACCTATTTCCTGCCAGTGATTGGATTGGTTGATGCAGAGAAATTGAAGCCTGGAGACCTG
GTGGGAGTAAACAAAGACTCCTATCTGATCCTGGAGACCCTGCCCACCGAGTATGATTCCCGAGTGAAGGCCATGGAGGT
GGATGAGAGGCCCACAGAGCAGTACAGTGACATTGGAGGGCTGGACAAACAAATCCAGGAGCTGGTAGAGGCTATTGTAT
TGCCAATGAACCATAAAGAGAAATTTGAGAATTTGGGGATTCAGCCTCCAAAGGGAGTATTGATGTATGGACCCCCTGGC
ACTGGGAAAACTTTGCTAGCCCGAGCGTGTGCTGCACAGACCAAGGCCACCTTCTTGAAGTTGGCTGGCCCTCAGCTGGT
ACAGATGTTCATTGGGGATGGAGCAAAACTTGTCCGAGATGCCTTTGCCCTGGCCAAAGAGAAAGCTCCCTCCATTATCT
TCATTGATGAACTGGATGCCATTGGAACCAAGCGCTTTGACAGTGAGAAGGCCGGGGATCGAGAGGTTCAGAGAACCATG
TTGGAGCTCCTGAACCAGCTGGATGGATTCCAGCCTAACACCCAAGTCAAGGTGATTGCTGCTACAAACAGGGTGGACAT
CCTGGACCCAGCCTTGCTGCGCTCAGGGCGCCTGGACCGGAAAATTGAGTTCCCGATGCCCAATGAGGAAGCCCGAGCCA
GGATCATGCAGATCCATTCCCGAAAGATGAACGTGAGCCCCGACGTGAACTATGAGGAGCTGGCCCGCTGCACGGATGAC
TTCAATGGGGCCCAGTGCAAGGCTGTGTGTGTGGAAGCGGGAATGATCGCGCTCCGGCGGGGAGCCACCGAGCTCACCCA
CGAGGACTACATGGAGGGCATCCTGGAGGTGCAGGCCAAGAAGAAAGCCAATCTCCAGTACTACGCCTGA
ATGCGTAGAGGAGACGGAGCTGTACTGTGGCCTTTGCGGGGAGTCCATCGGGGAGAGGAACAATCGGCTGCAGGCCCTGC
CGTGCTCCCACTTCTTCCACCTCAGCAAGATGGCATTGGAGAGGAAGTGCTTAAAATGTCCACAGAGGAGATTATTCAAC
GCACTCGTCTACTGGATAGTGAGATCAAGATCATGAAGAGTGAAGTGTTACGTGTGACACATGAGCTGCAGGCAATGAAG
GACAAGATCAAAGAGAACAGTGAGAAGATCAAAGTGAACAAGACGCTGCCCTACCTGGTGTCCAACGTTATCGAGCTGCT
AGATGTTGACCCCAATGACCAAGAAGAAGATGGTGCAAACATTGACCTTGACTCCCAGAGGAAAGGCAAATGCGCTGTGA
TCAAAACCTCTACCCGACAGACCTATTTCCTGCCAGTGATTGGATTGGTTGATGCAGAGAAATTGAAGCCTGGAGACCTG
GTGGGAGTAAACAAAGACTCCTATCTGATCCTGGAGACCCTGCCCACCGAGTATGATTCCCGAGTGAAGGCCATGGAGGT
GGATGAGAGGCCCACAGAGCAGTACAGTGACATTGGAGGGCTGGACAAACAAATCCAGGAGCTGGTAGAGGCTATTGTAT
TGCCAATGAACCATAAAGAGAAATTTGAGAATTTGGGGATTCAGCCTCCAAAGGGAGTATTGATGTATGGACCCCCTGGC
ACTGGGAAAACTTTGCTAGCCCGAGCGTGTGCTGCACAGACCAAGGCCACCTTCTTGAAGTTGGCTGGCCCTCAGCTGGT
ACAGATGTTCATTGGGGATGGAGCAAAACTTGTCCGAGATGCCTTTGCCCTGGCCAAAGAGAAAGCTCCCTCCATTATCT
TCATTGATGAACTGGATGCCATTGGAACCAAGCGCTTTGACAGTGAGAAGGCCGGGGATCGAGAGGTTCAGAGAACCATG
TTGGAGCTCCTGAACCAGCTGGATGGATTCCAGCCTAACACCCAAGTCAAGGTGATTGCTGCTACAAACAGGGTGGACAT
CCTGGACCCAGCCTTGCTGCGCTCAGGGCGCCTGGACCGGAAAATTGAGTTCCCGATGCCCAATGAGGAAGCCCGAGCCA
GGATCATGCAGATCCATTCCCGAAAGATGAACGTGAGCCCCGACGTGAACTATGAGGAGCTGGCCCGCTGCACGGATGAC
TTCAATGGGGCCCAGTGCAAGGCTGTGTGTGTGGAAGCGGGAATGATCGCGCTCCGGCGGGGAGCCACCGAGCTCACCCA
CGAGGACTACATGGAGGGCATCCTGGAGGTGCAGGCCAAGAAGAAAGCCAATCTCCAGTACTACGCCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 0 .00 RPM |
| SRP007412_cerebellum | 0 .00 RPM |
| SRP007412_heart | 0 .00 RPM |
| SRP007412_kidney | 0 .00 RPM |
| SRP007412_liver | 0 .00 RPM |
| SRP007412_testis | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000008701 | ortholog_one2many | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000003992 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mdom_1035 | 97.59 | 82.85 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mdom_1540 | 59.81 | 69.93 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMODG00000019911 retrocopies