Parental gene: | Setd3, ENSMUSG00000056770 |
| Aliases: | Setd3, 2610102I01Rik, 2610305M23Rik, 6030490B17Rik, D12Ertd771e |
| Description: | SET domain containing 3 [Source:MGI Symbol;Acc:MGI:1289184] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 12:108106430..108179314(-) |
>ENSMUSG00000056770
ATGGGTAAGAAGAGTCGAGTGAAAACTCAGAAATCAGGTACTGGGGCTACAGCCACTGTGTCACCAAAGGAAATTTTGAA
CCTGACAAGTGAGCTGTTGCAGAAATGTAGCAGTCCTGCACCCAGCCCAGGGAAAGAATGGGAAGAGTACACGCAGATCC
GGGCTCTGGTTGAGAAAATACGGAAGAAGCAAAAAGGTCTGTCTGTTACTTTTGATGGGAAAAGAGAAGATTACTTCCCT
GATCTAATGAAATGGGCCTCTGAAAACGGGGCTTCTGTCGAGGGTTTTGAAATGGTTAACTTCAAAGAAGAGGGCTTTGG
TTTGAGAGCAACAAGAGACATCAAGGCAGAAGAATTATTTTTATGGGTTCCACGAAAGTTACTAATGACTGTTGAATCTG
CTAAGAATTCAGTATTGGGGCCCCTGTATTCTCAAGACCGAATTCTCCAAGCTATGGGAAACATTGCACTGGCCTTTCAT
CTGCTGTGCGAGCGAGCCAGCCCCAACTCTTTCTGGCAGCCATACATTCAGACCCTCCCCAGTGAATATGACACCCCTCT
CTACTTCGAAGAAGAGGAAGTACGCTGTCTTCAGTCAACACAAGCCATCCATGATGTCTTCAGCCAGTATAAAAACACAG
CACGCCAGTACGCCTATTTCTATAAAGTCATCCAGACCCATCCTCATGCCAACAAACTGCCCTTGAAGGAGTCTTTCACT
TACGAGGACTACAGGTGGGCCGTCTCATCAGTTATGACACGGCAAAACCAAATTCCTACAGAGGATGGTTCCCGGGTGAC
CTTGGCTCTGATTCCTTTATGGGACATGTGCAATCATACCAATGGCCTGATCACAACTGGCTATAACCTGGAAGATGACC
GCTGTGAGTGTGTGGCTCTGCAGGACTTTCAGGCTGGAGATCAGATTTACATTTTTTATGGCACTCGGTCAAATGCAGAG
TTTGTGATCCACAGTGGTTTTTTCTTTGACAATAATTCCCACGACAGAGTGAAAATTAAGCTGGGCGTGAGTAAAAGTGA
CAGGCTCTACGCCATGAAGGCTGAGGTCCTGGCTCGGGCTGGCATCCCAACATCCAGTGTTTTTGCGTTGCATTCCACTG
AGCCGCCCATCTCTGCCCAGCTTCTAGCTTTTCTCCGAGTATTCTGCATGACCGAAGAGGAGCTGAAAGAGCATTTGCTA
GGGGACAGCGCCATTGACAGGATCTTCACTCTGGGGAACGCAGAGTTTCCTGTCAGCTGGGACAATGAGGTCAAACTTTG
GACATTTCTGGAAGATAGAGCCTCACTTCTTTTAAAAACATATAAGACAACAATTGAGGAAGATAAGATCGTCTTGAAAA
ATCCTGACCTCTCTGTCCGGGCCACAATGGCCATCAAATTGCGCTTGGGTGAAAAGGAGATTTTGGAAAAAGCAGTGAAG
AGTGCGGCCGTGAACCGGGAGTACTACCGTAAACACATGGAGGAGAGGGCACCACTGCCCAGATACGAGGAGAGTGACCT
GGGGCTCTTGGAGGGTGGTGTGGGGGACTCAAGGCTCCCTCTGGTCCTGAGAAAGTTGGAGGAGGAAGCAGGTGTGCAGG
AGTCTCTGAGCCTCACAGAGACTGTCAGCAAAGTCAAGGCTGCTGAAAATGGGCTTGTCAATGGGGAAAACTTGATCCCT
AATGGGACCAGGTCTGAAAATGAAAGCTTAAGCCCAGAAGAAAGTGAAAACGTGACTGGAGAAGAGTCTTCAGGCAGCAT
GGCCAAGGTGAAGGAGCGACTTTGA
ATGGGTAAGAAGAGTCGAGTGAAAACTCAGAAATCAGGTACTGGGGCTACAGCCACTGTGTCACCAAAGGAAATTTTGAA
CCTGACAAGTGAGCTGTTGCAGAAATGTAGCAGTCCTGCACCCAGCCCAGGGAAAGAATGGGAAGAGTACACGCAGATCC
GGGCTCTGGTTGAGAAAATACGGAAGAAGCAAAAAGGTCTGTCTGTTACTTTTGATGGGAAAAGAGAAGATTACTTCCCT
GATCTAATGAAATGGGCCTCTGAAAACGGGGCTTCTGTCGAGGGTTTTGAAATGGTTAACTTCAAAGAAGAGGGCTTTGG
TTTGAGAGCAACAAGAGACATCAAGGCAGAAGAATTATTTTTATGGGTTCCACGAAAGTTACTAATGACTGTTGAATCTG
CTAAGAATTCAGTATTGGGGCCCCTGTATTCTCAAGACCGAATTCTCCAAGCTATGGGAAACATTGCACTGGCCTTTCAT
CTGCTGTGCGAGCGAGCCAGCCCCAACTCTTTCTGGCAGCCATACATTCAGACCCTCCCCAGTGAATATGACACCCCTCT
CTACTTCGAAGAAGAGGAAGTACGCTGTCTTCAGTCAACACAAGCCATCCATGATGTCTTCAGCCAGTATAAAAACACAG
CACGCCAGTACGCCTATTTCTATAAAGTCATCCAGACCCATCCTCATGCCAACAAACTGCCCTTGAAGGAGTCTTTCACT
TACGAGGACTACAGGTGGGCCGTCTCATCAGTTATGACACGGCAAAACCAAATTCCTACAGAGGATGGTTCCCGGGTGAC
CTTGGCTCTGATTCCTTTATGGGACATGTGCAATCATACCAATGGCCTGATCACAACTGGCTATAACCTGGAAGATGACC
GCTGTGAGTGTGTGGCTCTGCAGGACTTTCAGGCTGGAGATCAGATTTACATTTTTTATGGCACTCGGTCAAATGCAGAG
TTTGTGATCCACAGTGGTTTTTTCTTTGACAATAATTCCCACGACAGAGTGAAAATTAAGCTGGGCGTGAGTAAAAGTGA
CAGGCTCTACGCCATGAAGGCTGAGGTCCTGGCTCGGGCTGGCATCCCAACATCCAGTGTTTTTGCGTTGCATTCCACTG
AGCCGCCCATCTCTGCCCAGCTTCTAGCTTTTCTCCGAGTATTCTGCATGACCGAAGAGGAGCTGAAAGAGCATTTGCTA
GGGGACAGCGCCATTGACAGGATCTTCACTCTGGGGAACGCAGAGTTTCCTGTCAGCTGGGACAATGAGGTCAAACTTTG
GACATTTCTGGAAGATAGAGCCTCACTTCTTTTAAAAACATATAAGACAACAATTGAGGAAGATAAGATCGTCTTGAAAA
ATCCTGACCTCTCTGTCCGGGCCACAATGGCCATCAAATTGCGCTTGGGTGAAAAGGAGATTTTGGAAAAAGCAGTGAAG
AGTGCGGCCGTGAACCGGGAGTACTACCGTAAACACATGGAGGAGAGGGCACCACTGCCCAGATACGAGGAGAGTGACCT
GGGGCTCTTGGAGGGTGGTGTGGGGGACTCAAGGCTCCCTCTGGTCCTGAGAAAGTTGGAGGAGGAAGCAGGTGTGCAGG
AGTCTCTGAGCCTCACAGAGACTGTCAGCAAAGTCAAGGCTGCTGAAAATGGGCTTGTCAATGGGGAAAACTTGATCCCT
AATGGGACCAGGTCTGAAAATGAAAGCTTAAGCCCAGAAGAAAGTGAAAACGTGACTGGAGAAGAGTCTTCAGGCAGCAT
GGCCAAGGTGAAGGAGCGACTTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 90 .34 RPM |
| SRP007412_cerebellum | 85 .89 RPM |
| SRP007412_heart | 60 .86 RPM |
| SRP007412_kidney | 90 .97 RPM |
| SRP007412_liver | 66 .85 RPM |
| SRP007412_testis | 88 .05 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ornithorhynchus anatinus | ENSOANG00000003153 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_305 | 92.97 | 54.71 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_1971 | 96.34 | 55.05 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000056770 retrocopies