Parental gene:

Scoc, ENSMUSG00000063253

Aliases:Scoc, 0610011C06Rik, 2810002J11Rik, AA415030, SCOCO
Description:short coiled-coil protein [Source:MGI Symbol;Acc:MGI:1927654]
Organism:Mouse (Mus musculus)
Coordinates:8:83434492..83458391(-)


>ENSMUSG00000063253
ATGAGCAAGATGGACGGATTGAGCACAGGGGAGGAGGAAGACAGCACGTTCACCAGCATTTCTCTTGAAGATGACACAGA
CCATTCTTTAAAGAGTTGGCGTTCGAGGGCTGAAAGTCTGCTACCCAAGATGATGAATGCTGACATGGACGCAGTTGATG
CTGAAAATCAGGTGGAACTGGAAGAAAAGACTCGACTTATTAATCAGGTGTTGGAACTCCAACACACACTTGAAGATCTT
TCTGCAAGAGTAGATGCAGTTAAGGAAGAAAATCTGAAGCTAAAGTCGGAAAATCAAGTTCTCGGACAATATATAGAAAA
CCTCATGTCTGCTTCTAGTGTTTTTCAAACAACTGATACAAAAAGCAAAAGGAAGTAA

Library Parental gene expression (RPM)
SRP007412_brain 39 .67 RPM
SRP007412_cerebellum 20 .67 RPM
SRP007412_heart 7 .63 RPM
SRP007412_kidney 22 .85 RPM
SRP007412_liver 1 .97 RPM
SRP007412_testis 2 .01 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000010957 possible_ortholog 2 retrogenes
retro_amel_176, retro_amel_725,
Callithrix jacchus ENSCJAG00000003060 possible_ortholog 2 retrogenes
retro_cjac_713, retro_cjac_95,
Erinaceus europaeus ENSEEUG00000011107 possible_ortholog 1 retrogene
retro_eeur_19,
Macropus eugenii ENSMEUG00000014534 ortholog_one2one 2 retrogenes
retro_meug_1580, retro_meug_823,
Monodelphis domestica ENSMODG00000025528 ortholog_one2one 2 retrogenes
retro_mdom_1163, retro_mdom_1265,
Oryctolagus cuniculus ENSOCUG00000006591 possible_ortholog 3 retrogenes
retro_ocun_1400, retro_ocun_1657, retro_ocun_429,
Rattus norvegicus ENSRNOG00000003853 ortholog_one2one 1 retrogene
retro_rnor_609,
Sarcophilus harrisii ENSSHAG00000003474 ortholog_one2one 1 retrogene
retro_shar_572,
Tarsius syrichta ENSTSYG00000011814 possible_ortholog 6 retrogenes
retro_tsyr_1232, retro_tsyr_1446, retro_tsyr_1566, retro_tsyr_2025, retro_tsyr_34, retro_tsyr_446,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_1639 97.98 79.20
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2. retro_mmus_2306 91.92 79.20
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Download FASTA sequences of all ENSMUSG00000063253 retrocopies