Parental gene: | Csde1, ENSMUSG00000068823 |
| Aliases: | Csde1, AA960392, BC016898, D3Jfr1, mKIAA0885, unr |
| Description: | cold shock domain containing E1, RNA binding [Source:MGI Symbol;Acc:MGI:92356] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 3:103020545..103058189(+) |
>ENSMUSG00000068823
ATGAGCTTTGATCCAAACCTTCTCCACAACAATGGACACAATGGGTACCCCAATGGTACTTCAGCAGCACTTCGTGAAAC
TGGGGTTATTGAAAAACTCTTGACCTCTTACGGATTCATTCAGTGTTCAGAACGGCAAGCTAGACTTTTCTTCCACTGTT
CACAATATAATGGCAACCTCCAAGACTTAAAAGTAGGAGATGATGTTGAATTTGAAGTATCATCTGACCGGAGGACTGGG
AAACCTATTGCTATTAAATTGGTGAAGATAAAACCAGAAATACATCCTGAAGAACGAATGAACGGACAAGTTGTGTGCGC
TGTTCCTCACAACTTAGAGAGTAAATCTCCAGCTGCCCCGGGTCAGAGTCCAACAGGGAGTGTATGCTACGAACGTAATG
GGGAAGTATTTTATCTGACTTACACCTCTGAAGATGTGGAAGGGAATGTTCAGCTGGAAACTGGAGATAAAATTAACTTT
GTAATTGATAACAATAAACACACTGGTGCTGTAAGTGCTCGTAATATTATGCTGTTGAAAAAGAAGCAGGCTCGCTGTCA
AGGAGTAGTTTGTGCCATGAAGGAGGCGTTTGGCTTTATCGAAAGAGGTGATGTTGTAAAAGAGATATTCTTTCACTATA
GTGAATTTAAAGGTGACCTAGAAACCCTACAGCCTGGAGATGACGTGGAATTCACAATCAAGGACAGAAATGGTAAAGAA
GTTGCAACAGATGTCAGACTATTGCCTCAAGGAACAGTCATTTTTGAAGATATCAGCATTGAACATTTTGAAGGAACTGT
AACCAAAGTTATCCCAAAAGTACCCAGTAAAAACCAGAATGACCCATTGCCAGGACGAATCAAAGTTGACTTTGTGATTC
CTAAAGAACTTCCCTTTGGAGACAAAGACACAAAATCCAAAGTGACCCTGCTGGAAGGTGACCATGTTAGGTTTAATATT
TCAACAGACCGACGTGACAAATTGGAACGAGCAACCAACATAGAGGTTCTATCAAATACATTTCAGTTCACTAATGAAGC
CAGAGAGATGGGTGTGATTGCTGCCATGAGAGATGGTTTTGGTTTCATCAAGTGTGTGGATCGTGATGCTCGTATGTTCT
TCCACTTCAGTGAGATTCTAGATGGGAACCAGCTCCACATTGCAGATGAAGTAGAGTTTACTGTGGTTCCTGATATGCTC
TCTGCCCAAAGAAATCATGCTATTAGGATTAAAAAACTTCCCAAGGGCACGGTTTCATTCCATTCCCATTCAGATCATCG
TTTTCTGGGCACCGTAGAAAAAGAAGCCACTTTTTCCAATCCTAAAACTACAAGCCCAAATAAAGGCAAAGACAAGGAGG
CAGAAGATGGCATTATAGCTTATGACGACTGTGGGGTGAAACTGACGATTGCTTTTCAAGCCAAGGATGTGGAAGGATCT
ACTTCTCCTCAAATAGGAGATAAGGTTGAATTTAGTATTAGTGACAAACAGAGGCCTGGACAGCAGATTGCAACTTGCGT
GAGACTTTTAGGTCGTAATTCTAACTCCAAACGTCTCTTGGGTTATGTGGCAACTCTGAAAGATAATTTTGGATTTATAG
AAACAGCTAATCATGATAAGGAAATATTTTTCCACTATAGTGAGTTCTCTGGTGATGTTGATAGCCTGGAACTGGGAGAC
ATGGTTGAATACAGCTTGTCCAAAGGCAAAGGCAATAAAGTCAGTGCTGAGAAAGTAAACAAAGCCCACTCAGTGAATGG
CATTACTGAGGAAGCTAATCCCACCATCTACTCTGGTAAAGTCATTCGCCCTCTGAGAGGTGTTGATCCAACACAGATTG
AGTACCAAGGAATGATTGAGATTGTGGAGGAGGGGGATATGAAAGGTGAAGTGTATCCTTTTGGCATAGTTGGGATGGCC
AACAAAGGGGATTGCCTACAGAAAGGGGAGAGTGTCAAGTTCCAGTTGTGTGTACTTGGCCAAAATGCACAAACTATGGC
CTACAACATCACACCCCTTCGTAGGGCTACTGTGGAGTGTGTGAAAGATCAGTTTGGCTTTATTAACTATGAAGTAGGAG
ATAGCAAGAAGCTCTTTTTCCATGTGAAAGAAGTTCAGGATGGCGTTGAGCTACAGGCAGGAGATGAGGTGGAATTCTCA
GTGATCCTTAATCAGCGCACTGGGAAGTGCAGTGCCTGTAATGTCTGGCGAGTCTGTGAAGGCCCCAAAGCTGTTGCAGC
TCCTCGACCTGACCGGTTGGTCAATCGCCTAAAGAACATCACCCTGGATGATGCCAGTGCTCCACGTCTAATGGTTCTTC
GTCAGCCAAGGGGACCAGATAACTCAATGGGATTTGGTGCAGAAAGAAAGATCCGTCAAGCTGGTGTCATTGACTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 218 .63 RPM |
| SRP007412_cerebellum | 220 .62 RPM |
| SRP007412_heart | 590 .32 RPM |
| SRP007412_kidney | 378 .16 RPM |
| SRP007412_liver | 228 .52 RPM |
| SRP007412_testis | 556 .05 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000017129 | ortholog_one2one | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000000538 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000005681 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000030302 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_1757 | 89.64 | 62.78 | Please wait, loading  |
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Download FASTA sequences of all ENSMUSG00000068823 retrocopies