Parental gene:

PSMG2, ENSOCUG00000005086

Aliases:None
Description:proteasome (prosome, macropain) assembly chaperone 2 [Source:HGNC Symbol;Acc:24929]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:9:49414260..49438288(-)


>ENSOCUG00000005086
ATGCCCTCCGCCTGCCGCGCCACCTTCTCGCAGGCCCGCACCCCGCAACCTCTGCTCGCCCCGTCGCCGGGACTGGCCAG
GGTCTCCCAACAGAGCTCCCCGTTTCCCTTCCCAGTCCTCGCGGCGGCCTCGTTCCTCCCTCCGGCCCGGCAGGGAACTG
GACGGACCCTCAGGACCCCGCGCCGAGGGACTCCAAGGTCCCGCCTGCGTCTGTGGGTTCTAGGGACTGGGCCACCGGGT
ACGGCGCCCTGCTCCGGCTTCCGCCGACCCGCGGCCGCTGTGTTTCCAGGCCTGCGCTCGACCCCGTGCTCCGGCCGTGC
AGGGACCATGTTCATTCCCTGCGGGGAGACGTTCCCCGACCTGTCGGGCTTCACGCTCCTGATGCCAGCAGTGTCTGTTG
GAAATGTTGGCCAGCTTGCAATAGATCTGATCATTTCTACCCTGGATATGTGTAAGATTGGTTACTTCTATACTGATTGT
CTTGTGCCAATTGTTGGAAACAATCCCTATGCAACGGCAAACGAGAATGCAGCAGAACTCAGTACCAATGCTGAAGTGTA
TTCATTGCCTTCAAAGAAGCTAGTGGTTCTTCAGTTAAGATCCATTTTTATTAAGTATAAATCGAAGTCATTCTGTGAAA
AACTGCTTTGCTGGGTGGAAAATAGCGGCTGCACCAGAGTCATTGTTCTTTCTAGCAGTCATTCCTATCACCGAAATGAC
AAACAGCTGTGTAGCACTCCCTTCCGGTATCTACTTACACCTTCCATGCAAAAAACTGTTCAAAATAAAATAAAGAGCCT
TAACTGGCAAGAAATGGAAAAAAGCCCGTGTATTCCTGAAATAGAAGATTCTGATCTTTGTGTCCGTGTTCCAGGAGGAG
GCATCACAAAGTTACTGTATGATGAAAGCTGTTCTAAAGATATCCAGATGGCAGTTCTGCTAAAATTTGTCTCGGAAGGG
GACAATATCCCAGATGCATTGGGTCTTGTTGAATATCTAAACGAATGGCTTCAAATAATCAAACCACATGTACAGGGTGA
TGACCCTACAGCATCCACCTTGCCATGGAAAATCCCAAGTTCCTGGAGATTACTCTTTGGCAGTGGTCTTCCTCCTGCAC
TCTTTTGA

Library Parental gene expression (RPM)
SRP017611_brain 12 .03 RPM
SRP017611_kidney 17 .03 RPM
SRP017611_liver 5 .40 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000018855 ortholog_one2one 1 retrogene
retro_cfam_424,
Choloepus hoffmanni ENSCHOG00000010042 ortholog_one2many 1 retrogene
retro_chof_1738,
Myotis lucifugus ENSMLUG00000017744 ortholog_one2one 1 retrogene
retro_mluc_2496,
Macaca mulatta ENSMMUG00000021855 ortholog_one2many 1 retrogene
retro_mmul_198,
Nomascus leucogenys ENSNLEG00000009063 ortholog_one2one 1 retrogene
retro_nleu_1753,
Sus scrofa ENSSSCG00000021827 ortholog_one2many 2 retrogenes
retro_sscr_1008, retro_sscr_763,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_1448 61.42 51.20
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Download FASTA sequences of all ENSOCUG00000005086 retrocopies