Parental gene:

GLYR1, ENSOCUG00000010486

Aliases:None
Description:glyoxylate reductase 1 homolog (Arabidopsis) [Source:HGNC Symbol;Acc:24434]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:GL018787:998971..1031553(-)


>ENSOCUG00000010486
ATGGCGACTGTGAGTCTGCGGCTCGGCGACTTGGTGTGGGGGAAGCTCGGCCGGTACCCTCCTTGGCCTGGGAAGATTGT
TAATCCACCCAAAGACTTGAAGAAACCACGTGGAAAGAAATGCTTCTTTGTGAAGTTTTTTGGAACAGAAGATCATGCTT
GGATCAAAGTGGAGCAGCTCAAGCCATATCATGCTCACAAGGAGGAGATGATCAAGATTAACAAGGGCAAGCGGTTCCAA
CAGGCTGTGGATGCCGTGGAAGAGTTCCTCAGGAGAGCCAAGGGGAAAGACCAGACCTCATCCCACAGTTCTGCTGATGA
CAAGAATCGGCGTAATTCCAGTGAGGAAAGAAGTAGGCCAAACTCAGGTGATGAGAAGCGCAAACTTAGCCTGTCTGAAG
GGAAGGTGAAGAAGAACATGGGAGAAGGAAAGAAGAGGGTGTCTTCAGGCTCTGCAGAGAGAGGCTCCAAATCCCCCCTG
AAAAGAGCCCAAGAGCAAAGTCCCCGGAAGCGGGGTCGGCCCCCAAAGGATGAGAAGGATCTCACCATCCCCGAGTCTAG
TACCGTGAAGGGGATGATGGCTGGACCGATGGCCGCGTTTAAATGGCAGCCGACTGTGAGCGAGCCCGTTAAAGACGCAG
ATCCTCATTTCCATCACTTCCTGCTGAGCCAGACAGAGAAGCCAGCTGTCTGTTACCAGGCAATCACAAAGAAGTTGAAA
ATATGTGAAGAGGAAACTGGATCCACCTCTATCCAGGCAGCAGACAGCACAGCTGTGAATGGCAGCATCACGCCCACAGA
CAAAAAGATAGGATTTTTGGGCCTTGGACTCATGGGAAGTGGCATCGTCTCCAACTTACTAAAAATGGGTCACACAGTGA
CTGTCTGGAACCGGACTGCCGAAAAATGTGATTTGTTCATCCAGGAGGGGGCCCGCCTGGGAAGAACCCCCGCTGAAGTT
GTTTCAACTTGTGACATCACTTTCGCCTGTGTGTCAGATCCTAAGGCAGCCAAGGACCTGGTGCTGGGCCCCAGCGGTGT
GCTGCAAGGGATCCGCCCGGGGAAGTGCTACGTGGACATGTCAACAGTGGACGCCGACACAGTCACCGAGCTGGCCCAGG
TGATTGTGTCCAGGGGGGGCCGCTTTCTGGAGGCCCCAGTCTCAGGGAACCAGCAGCTGTCTAATGATGGGATGTTGGTG
ATCTTAGCAGCCGGAGACAGGGGCTTGTACGAGGACTGCAGCAGCTGCTTCCAGGCGATGGGGAAGACCTCCTTCTTCCT
AGGTGAAGTTGGCAACGCAGCCAAGATGATGCTGATTGTGAACATGGTCCAGGGGAGCTTCATGGCCACCATTGCTGAGG
GACTGACCCTGGCCCAGGTGACAGGCCAGTCACAACAGACACTCTTAGACATCCTCAATCAGGGACAGCTGGCCAGCATT
TTCCTGGACCAGAAGTGCCAAAATATCCTACAAGGAAACTTTAAGCCTGATTTCTACCTGAAATATATTCAAAAGGATCT
CCGCTTAGCCATTGCACTGGGTGATGCCGTCAACCATCCAACTCCTATGGCAGCTGCAGCCAATGAGGTATACAAAAGAG
CCAAGGCACTGGACCAGTCTGACAACGATATGTCTGCCGTGTACCGAGCCTACATCCACTAA

Library Parental gene expression (RPM)
SRP017611_brain 52 .70 RPM
SRP017611_kidney 46 .22 RPM
SRP017611_liver 17 .03 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000019912 ortholog_one2one 1 retrogene
retro_cjac_2514,
Erinaceus europaeus ENSEEUG00000011783 ortholog_one2one 1 retrogene
retro_eeur_477,
Homo sapiens ENSG00000140632 ortholog_one2one 1 retrogene
retro_hsap_2432,
Gorilla gorilla ENSGGOG00000016258 ortholog_one2one 1 retrogene
retro_ggor_1512,
Macaca mulatta ENSMMUG00000009567 ortholog_one2one 1 retrogene
retro_mmul_621,
Nomascus leucogenys ENSNLEG00000009950 ortholog_one2one 1 retrogene
retro_nleu_240,
Oryctolagus cuniculus ENSOCUG00000010349 within_species_paralog 1 retrogene
retro_ocun_1896,
Pongo abelii ENSPPYG00000007072 ortholog_one2one 1 retrogene
retro_pabe_1791,
Pan troglodytes ENSPTRG00000007730 ortholog_one2one 1 retrogene
retro_ptro_1404,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_680 98.55 100.00
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Download FASTA sequences of all ENSOCUG00000010486 retrocopies