Parental gene: | USP1, ENSOGAG00000009357 |
| Aliases: | None |
| Description: | ubiquitin specific peptidase 1 [Source:HGNC Symbol;Acc:12607] |
| Organism: | Bushbaby (Otolemur garnettii) |
| Coordinates: | GL873585.1:9155602..9167921(+) |
>ENSOGAG00000009357
ATGCCTGGTGTCATACCTAGTGAAAATAATGGACTTTCGAGAGGTAGTCCATCTAAGAAAAACAGACTTTCCTTAAAGTT
TTTTCAGAAAAAGGAAACTAAGAGAGCCTTGGATTTCACAGATTCTCAAGAAAATGAAGAAAAAGCTTCTGAATATAGAG
GATCTGAAATTGATCAAGTTGTTCCTGCAGCACAATCCTCACCTTTAAACTGCGAGAAGAGAGAAAATTTACTACCATTT
GTGGGACTGAATAATCTTGGCAATACTTGTTATCTTAATAGCATACTTCAGGTACTATATTTTTGTCCTGGTTTTAAGTC
TGGAGTGAAGCACTTATTTAATATTATTTCAAGGAAGAAAGAAGCTCTAAAAGATGAAGCCAATCAAAAAGATAAGGGAA
ATTGCAAAGAAGATTCTTTGGCAAGTTATGAACTCATATGTAGTTTACAGTCCTTAATCATTTCAGTTGAACAGCTTCAG
GCTAGTTTTCTCTTAAATCCAGAGAAATATACTGAAGAGCTTGCTACTCAGCCAAGGCGACTACTTAATACACTCAGGGA
ACTCAACCCTATGTATGAAGGATATCTACAGCATGATGCACAGGAAGTACTACAGTGTATTTTGGGAAACATTCAAGAAA
CATGCCAGCTCCTAAAAAAAGAGGAAGTAAAAAATGTGGCAGAATTATCTACTAAGGTGGAAGAAAACCCTAATCAGAAA
GAGGAAATGAGTGGTTTTAATGGCATGGAGACTGACAATGTTAGGCATTTTGAAGAGTGTAAAGAAAAACTCCCCAAAGG
AAATGGGAAAAGAAAAAGTGACATTGAATTTGGTAACATGAAGAAAAAAGTTAAAGTATCCAAGGAACAACAGTCATTGG
AAGAGAACCACAGACAAACCAGATCAAAAAGAAAAGCTACAGATGATACATTAGAGGTTCCTCCTAAAATAATCCCCAAG
TACATATCTGAAAATGAGAGTACAAGACTCTCCCAAAAGAAATCAAGAGTTAAGATAAATTGGTTCAAGTCAGCAACTAA
GCAACCCAGCATTCTGTCTAAATTCTGTAGCCTGGGAAAAATAACAACAAGCCAAGGATCGAAAGGACAATCTAAAGAAG
ATGAGTATGATCTTGAAGAGGACTTGGGGAAGTGTGAAAGTACCAACACAGTTAATGGTTGTGGACTTGAATCTACAGGA
AATGATGTTAAACCTGTAGATGTTAATGAAGCTAAGCCCATTAACAAAGGTACAGAGCAAATTGGTTTTGAGCTAGTGGA
GAAATTATTTCAAGGTCAGCTGGTGTTAAGAACTCGTTGCTTGGAATGTGAAAGCTTAACCGAAAGAAGAGAAGATTTTC
AAGACATCAGTGTGCCAGTGCAAGAAGATGAGCTTTCCAAAGTAGAGGAGAGCTCTGAAATTTCTCCAGAGCCTAAGACA
GAAATGAAGACCCTGAGATGGGCAATTTCACAATTTGCTTCAGTAGAAAGGATTGTAGGAGAAGATAAATATTTCTGTGA
AAATTGCCATCATTATACTGAAGCTGAACGAAGTCTTTTGTTTGACAAAATGCCTGAAGTTATAACTATTCATTTGAAGT
GCTTTGCTGCTAGTGGCTTGGAGTTTGATTGTTACGGTGGTGGACTTTCCAAGATCAACACTCCTTTGTTGACGCCTCTT
AAATTGTCACTAGAGGAATGGAGCACAAAGCCGACCAACGACAGCTATGGATTATTTGCGGTTGTGATGCATAGCGGCAT
TACAATTAGTAGTGGGCACTATACTGCTTCTGTTAAAGTCACTGACCTTAGCAGTTTAGAACTAGATAAGGGAAATTTTG
TGGTTGACCAAATGTGTGAAATAGGTAAGCCAGAACCATTGAATGAGGAGGAAGCAAGGGGTGTGGTTGAAAATTATGAT
GATGAAGAAGTGTCGATTAGAGTTGGTGGAAGTACACAGCCAAGTAAAGTTTTGAACAAAAAAAATGTAGAAGCTATTGG
ACTTCTTGGAGGACAAAAGAGCAAAGCAGACTATGAACTGTACAGCAAAGCATCTAATCCTGATAAGGCTGCCAGCGCAG
CACTGGCTGAAAGTCGAAATTCTGAGACTAACAGTACTAATGGGACCCACGAATCTGATAGCAGTAAGGGATCCAGTGAC
CAAACAGGCATTAATATTAGTGGATTTGAGAACAAAATTTCCTATATAGTGCAAAGCTTGAAGGAGTATGAGGGGAAGTG
GTTGCTTTTTGATGATTCTGAAGTGAAAGTTACGGAAGAGAAGGACTTTCTGAATTCTCTTTCCCCTTCTACATCTCCTA
CGTCTACTCCTTACTTGCTATTTTATAAGAAATTACAGAGTTGA
ATGCCTGGTGTCATACCTAGTGAAAATAATGGACTTTCGAGAGGTAGTCCATCTAAGAAAAACAGACTTTCCTTAAAGTT
TTTTCAGAAAAAGGAAACTAAGAGAGCCTTGGATTTCACAGATTCTCAAGAAAATGAAGAAAAAGCTTCTGAATATAGAG
GATCTGAAATTGATCAAGTTGTTCCTGCAGCACAATCCTCACCTTTAAACTGCGAGAAGAGAGAAAATTTACTACCATTT
GTGGGACTGAATAATCTTGGCAATACTTGTTATCTTAATAGCATACTTCAGGTACTATATTTTTGTCCTGGTTTTAAGTC
TGGAGTGAAGCACTTATTTAATATTATTTCAAGGAAGAAAGAAGCTCTAAAAGATGAAGCCAATCAAAAAGATAAGGGAA
ATTGCAAAGAAGATTCTTTGGCAAGTTATGAACTCATATGTAGTTTACAGTCCTTAATCATTTCAGTTGAACAGCTTCAG
GCTAGTTTTCTCTTAAATCCAGAGAAATATACTGAAGAGCTTGCTACTCAGCCAAGGCGACTACTTAATACACTCAGGGA
ACTCAACCCTATGTATGAAGGATATCTACAGCATGATGCACAGGAAGTACTACAGTGTATTTTGGGAAACATTCAAGAAA
CATGCCAGCTCCTAAAAAAAGAGGAAGTAAAAAATGTGGCAGAATTATCTACTAAGGTGGAAGAAAACCCTAATCAGAAA
GAGGAAATGAGTGGTTTTAATGGCATGGAGACTGACAATGTTAGGCATTTTGAAGAGTGTAAAGAAAAACTCCCCAAAGG
AAATGGGAAAAGAAAAAGTGACATTGAATTTGGTAACATGAAGAAAAAAGTTAAAGTATCCAAGGAACAACAGTCATTGG
AAGAGAACCACAGACAAACCAGATCAAAAAGAAAAGCTACAGATGATACATTAGAGGTTCCTCCTAAAATAATCCCCAAG
TACATATCTGAAAATGAGAGTACAAGACTCTCCCAAAAGAAATCAAGAGTTAAGATAAATTGGTTCAAGTCAGCAACTAA
GCAACCCAGCATTCTGTCTAAATTCTGTAGCCTGGGAAAAATAACAACAAGCCAAGGATCGAAAGGACAATCTAAAGAAG
ATGAGTATGATCTTGAAGAGGACTTGGGGAAGTGTGAAAGTACCAACACAGTTAATGGTTGTGGACTTGAATCTACAGGA
AATGATGTTAAACCTGTAGATGTTAATGAAGCTAAGCCCATTAACAAAGGTACAGAGCAAATTGGTTTTGAGCTAGTGGA
GAAATTATTTCAAGGTCAGCTGGTGTTAAGAACTCGTTGCTTGGAATGTGAAAGCTTAACCGAAAGAAGAGAAGATTTTC
AAGACATCAGTGTGCCAGTGCAAGAAGATGAGCTTTCCAAAGTAGAGGAGAGCTCTGAAATTTCTCCAGAGCCTAAGACA
GAAATGAAGACCCTGAGATGGGCAATTTCACAATTTGCTTCAGTAGAAAGGATTGTAGGAGAAGATAAATATTTCTGTGA
AAATTGCCATCATTATACTGAAGCTGAACGAAGTCTTTTGTTTGACAAAATGCCTGAAGTTATAACTATTCATTTGAAGT
GCTTTGCTGCTAGTGGCTTGGAGTTTGATTGTTACGGTGGTGGACTTTCCAAGATCAACACTCCTTTGTTGACGCCTCTT
AAATTGTCACTAGAGGAATGGAGCACAAAGCCGACCAACGACAGCTATGGATTATTTGCGGTTGTGATGCATAGCGGCAT
TACAATTAGTAGTGGGCACTATACTGCTTCTGTTAAAGTCACTGACCTTAGCAGTTTAGAACTAGATAAGGGAAATTTTG
TGGTTGACCAAATGTGTGAAATAGGTAAGCCAGAACCATTGAATGAGGAGGAAGCAAGGGGTGTGGTTGAAAATTATGAT
GATGAAGAAGTGTCGATTAGAGTTGGTGGAAGTACACAGCCAAGTAAAGTTTTGAACAAAAAAAATGTAGAAGCTATTGG
ACTTCTTGGAGGACAAAAGAGCAAAGCAGACTATGAACTGTACAGCAAAGCATCTAATCCTGATAAGGCTGCCAGCGCAG
CACTGGCTGAAAGTCGAAATTCTGAGACTAACAGTACTAATGGGACCCACGAATCTGATAGCAGTAAGGGATCCAGTGAC
CAAACAGGCATTAATATTAGTGGATTTGAGAACAAAATTTCCTATATAGTGCAAAGCTTGAAGGAGTATGAGGGGAAGTG
GTTGCTTTTTGATGATTCTGAAGTGAAAGTTACGGAAGAGAAGGACTTTCTGAATTCTCTTTCCCCTTCTACATCTCCTA
CGTCTACTCCTTACTTGCTATTTTATAAGAAATTACAGAGTTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Myotis lucifugus | ENSMLUG00000012439 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000028560 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000030639 | within_species_paralog | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000013871 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ogar_3339 | 87.76 | 59.59 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOGAG00000009357 retrocopies