Parental gene: | COX20, ENSOPRG00000004534 |
| Aliases: | None |
| Description: | COX20 cytochrome C oxidase assembly factor [Source:HGNC Symbol;Acc:26970] |
| Organism: | Southern American pika (Ochotona princeps) |
| Coordinates: | scaffold_16415:392..6616(+) |
>ENSOPRG00000004534
ATGGACTCCGTGTCGGAGCCCGGCGAGCCCGGCAAGGGGAAGGTATATTGTATATGGTTATCATTCCAGCATTTATCATA
TTGGAAGACCTTTAAACTCCTAGGAATTTTAGATGTCGAAAACACTCCCTGTGCACGGGACTCCATATTGTATGGTTCAC
TGGGATCTGCTGTAAGTGGCCTGGGACACTTCTTGTTTACTAGTAGAATCAGAAGATCCTGTGATGTTGGAGTAGGAGGA
TTCATCTTGGTGACTTTAGGATGCTGGTTCCACTGTAGGTACAATTATGCAAAGCAAAGAATCCAGGAGAGAATTGCCAG
AGAAGGAATTAAAAATAAGATTTTATATGAAAGTACTCACCTTGATCCTCAAAGAAAACACAACAAAAGCAGCAATGGA
ATGGACTCCGTGTCGGAGCCCGGCGAGCCCGGCAAGGGGAAGGTATATTGTATATGGTTATCATTCCAGCATTTATCATA
TTGGAAGACCTTTAAACTCCTAGGAATTTTAGATGTCGAAAACACTCCCTGTGCACGGGACTCCATATTGTATGGTTCAC
TGGGATCTGCTGTAAGTGGCCTGGGACACTTCTTGTTTACTAGTAGAATCAGAAGATCCTGTGATGTTGGAGTAGGAGGA
TTCATCTTGGTGACTTTAGGATGCTGGTTCCACTGTAGGTACAATTATGCAAAGCAAAGAATCCAGGAGAGAATTGCCAG
AGAAGGAATTAAAAATAAGATTTTATATGAAAGTACTCACCTTGATCCTCAAAGAAAACACAACAAAAGCAGCAATGGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000001381 | ortholog_one2one | 4 retrogenes | |
| Erinaceus europaeus | ENSEEUG00000012147 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000203667 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000026132 | ortholog_one2one | 7 retrogenes | |
| Monodelphis domestica | ENSMODG00000024669 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000026500 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000004027 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000000053 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000002577 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000004553 | ortholog_one2one | 2 retrogenes | |
| Sorex araneus | ENSSARG00000004625 | ortholog_one2one | 2 retrogenes | |
| Tupaia belangeri | ENSTBEG00000015272 | ortholog_one2one | 4 retrogenes | |
| Tarsius syrichta | ENSTSYG00000005644 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_opri_31 | 56.58 | 57.14 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_opri_287 | 64.49 | 78.95 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_opri_585 | 56.58 | 57.14 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_opri_676 | 87.00 | 73.68 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_opri_720 | 57.32 | 59.40 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_opri_1072 | 64.49 | 78.95 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOPRG00000004534 retrocopies