Parental gene: | PABPN1L, ENSOPRG00000005597 |
| Aliases: | None |
| Description: | poly(A) binding protein, nuclear 1-like (cytoplasmic) [Source:HGNC Symbol;Acc:37237] |
| Organism: | Southern American pika (Ochotona princeps) |
| Coordinates: | GeneScaffold_5076:99159..101157(-) |
>ENSOPRG00000005597
ATGTGGCCCTTCCTGAGCCGCAAGCTCTTCCCGCCGCCCTCTGAGACCTGGCTCCAGGTGGTCTCCTCAGACCCCAAGGC
TCAGGGCTGGGGAGCCTGGGGCAGGACTGAGAAGACCCCATTGGGGGCTGACGCTGGGCACAGGAAGGAGCAGGAGGAGG
ACACGGAGGACGATGCCGGCCTGCTGCTGGCCCTGCTGGAGCCGGAACACCTGGCCCAGTGCCCGGTGCCTGACCAGGAG
CTGGAGGCCATCAAGCTGAAGCTGTGGGCCATGGAGCAGGCTGAGGAGGCACCACAGGCACCCAGAGCCGGAGGCGAGGC
TGGCCAGGAGGAGGATACACAGGCCAGCCAGCTGCTCAGCTCCGAGACCTCTGGCTGCTCCTTACCCGAGACCCCCAAGG
ACAAAGTGGAGGCTGACCACAGGTCCATCTACGTGGGCAACGTGGACTATGGGGGTACTGCCGAGGAGCTGGAGGCCTAC
TTCAACCACTGCGGCGAGATCCAGCGCGTCACCATCCTGTGCGACAAGTTCTCCGGACACCCCAAAGGCTACGCCTACAT
AGAGTTTGCCAGCGAGCGTTCTGCCCAGGCTGCTGTGGGGCTGGACGCCAGTGTCTTTCGGGGCCGAGTCATTAAGGTGC
TGCCCAAAAGGACCAACTTCCCAGGAATCAGCTCCACTGACCGCGGGGGCCTGCGGCTGCACCACAGCTCCAGGGCAGCG
TTTCCCTTCTGCCGCAGCAGCCTCCTGGGCAGGCCACGCTTCAGACCCCGAGGGCAGAACCGGGGCCGGGGGAGAGCGTT
GCCATGGTTCTCGCCATAC
ATGTGGCCCTTCCTGAGCCGCAAGCTCTTCCCGCCGCCCTCTGAGACCTGGCTCCAGGTGGTCTCCTCAGACCCCAAGGC
TCAGGGCTGGGGAGCCTGGGGCAGGACTGAGAAGACCCCATTGGGGGCTGACGCTGGGCACAGGAAGGAGCAGGAGGAGG
ACACGGAGGACGATGCCGGCCTGCTGCTGGCCCTGCTGGAGCCGGAACACCTGGCCCAGTGCCCGGTGCCTGACCAGGAG
CTGGAGGCCATCAAGCTGAAGCTGTGGGCCATGGAGCAGGCTGAGGAGGCACCACAGGCACCCAGAGCCGGAGGCGAGGC
TGGCCAGGAGGAGGATACACAGGCCAGCCAGCTGCTCAGCTCCGAGACCTCTGGCTGCTCCTTACCCGAGACCCCCAAGG
ACAAAGTGGAGGCTGACCACAGGTCCATCTACGTGGGCAACGTGGACTATGGGGGTACTGCCGAGGAGCTGGAGGCCTAC
TTCAACCACTGCGGCGAGATCCAGCGCGTCACCATCCTGTGCGACAAGTTCTCCGGACACCCCAAAGGCTACGCCTACAT
AGAGTTTGCCAGCGAGCGTTCTGCCCAGGCTGCTGTGGGGCTGGACGCCAGTGTCTTTCGGGGCCGAGTCATTAAGGTGC
TGCCCAAAAGGACCAACTTCCCAGGAATCAGCTCCACTGACCGCGGGGGCCTGCGGCTGCACCACAGCTCCAGGGCAGCG
TTTCCCTTCTGCCGCAGCAGCCTCCTGGGCAGGCCACGCTTCAGACCCCGAGGGCAGAACCGGGGCCGGGGGAGAGCGTT
GCCATGGTTCTCGCCATAC
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000023752 | ortholog_one2one | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000004747 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000004691 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_opri_174 | 94.58 | 74.36 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_opri_1001 | 94.58 | 74.36 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOPRG00000005597 retrocopies