Parental gene: | RNPC3, ENSPPYG00000001102 |
| Aliases: | None |
| Description: | RNA-binding protein 40 [Source:RefSeq peptide;Acc:NP_001126576] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 1:124976762..125033783(-) |
>ENSPPYG00000001102
ATGGCAGCTCCTGAGCAGCCACTTGCGATATCAAGGGGATGCACGAGCTCCTCCTCGCTTTCCCCGCCTCGGGGCGACCG
AACCCTTCTGGTCAGGCACCTGCCGGCTGAGCTTACCGCTGAGGAGAAAGAGGACTTGCTGAAGTACTTCGGGGCTCAGT
CTGTGCGGGTCCTGTCAGATAAGGGGCGACTGAAACATACAGCTTTTGCCACATTCCCTAATGAAAAAGCAGCTATAAAG
GCACTGACAAGACTCCATCAACTGAAACTTTTAGGTCATACTTTAGTCGTTGAATTTGCAAAAGAGCAAGATCGAGTTCA
CTCCCCATGTCCCACTTCAGGCTCTGAAAAAAAAAAAAGGTCTGATGACCCTGTTGAAGATGATAAAGAAAAGAAAGAAC
TTGGTTATTTAACAGTAGAAAACGGAATTGCACCAAACCATGGGCTGACTTTTCCTTTAAATTCATGCCTCAAGTATATG
TACCCACCACCCTTCCAGCACAATCCTAGCCAACATCGTAAATGCCTGGCAAGTGTGCCTAAGTTCTATGTACAGGTCCT
TCATCTTATGAATAAAATGAATTTGCCCACACCTTTTGGACCAATTACTGCGCGACCTCCCATGTATGAAGACTATATGC
CATTGCATGCACCTCTTCCACCCACATCTCCTCAGCCACCGGAGGAACCTCCTTTGCCAGAGGAGGATGAGGAGTTATCT
AGTGAAGAATCAGAATATGAAAGCACTGATGATGAGGACCGACAGAGAATGAACAAATTAATGGAACTAGCAAATCTTCA
GCCCAAAAGACCTAAAACAATAAAGCAGCGCCATGTGAGGAAAAAGAGAAAAATAAAGGATATGTTGAATACACCTTTGT
GTCCTTCACACAGCAGTTTACATCCAGTGCTGTTACCTTCAGATGTATTTGACCAACCACAACCTGTAGGTAATAAAAGA
ATTGAATTCCATATATCTACCGACATGCCAGCTGCATTTAAGAAAGATTTAGAAAAGGAACAAAATTGTGAGGAAAAAAA
TCATGATTTACCTGCTACTGAAGTTGATGCATCCAATATAGGATTTGGAAAAATCTTCCCCAAACCTAATTTGGACATCA
CAGAGGAGATTAAAGAAGACTCTGATGAAATGCCATCAGAATGTATTTCTAGAAGGGAATTGGAAAAGGGCAGAATTTCT
AGAGAAGAAATGGAAACACTTTCAGTTTTCAGAAGTTATGAACCTGGTGAACCAAACTGTAGAATTTATGTAAAGAATTT
AGCTAAACATGTTGAAGAAAAGGTAGGTGTAAATTGA
ATGGCAGCTCCTGAGCAGCCACTTGCGATATCAAGGGGATGCACGAGCTCCTCCTCGCTTTCCCCGCCTCGGGGCGACCG
AACCCTTCTGGTCAGGCACCTGCCGGCTGAGCTTACCGCTGAGGAGAAAGAGGACTTGCTGAAGTACTTCGGGGCTCAGT
CTGTGCGGGTCCTGTCAGATAAGGGGCGACTGAAACATACAGCTTTTGCCACATTCCCTAATGAAAAAGCAGCTATAAAG
GCACTGACAAGACTCCATCAACTGAAACTTTTAGGTCATACTTTAGTCGTTGAATTTGCAAAAGAGCAAGATCGAGTTCA
CTCCCCATGTCCCACTTCAGGCTCTGAAAAAAAAAAAAGGTCTGATGACCCTGTTGAAGATGATAAAGAAAAGAAAGAAC
TTGGTTATTTAACAGTAGAAAACGGAATTGCACCAAACCATGGGCTGACTTTTCCTTTAAATTCATGCCTCAAGTATATG
TACCCACCACCCTTCCAGCACAATCCTAGCCAACATCGTAAATGCCTGGCAAGTGTGCCTAAGTTCTATGTACAGGTCCT
TCATCTTATGAATAAAATGAATTTGCCCACACCTTTTGGACCAATTACTGCGCGACCTCCCATGTATGAAGACTATATGC
CATTGCATGCACCTCTTCCACCCACATCTCCTCAGCCACCGGAGGAACCTCCTTTGCCAGAGGAGGATGAGGAGTTATCT
AGTGAAGAATCAGAATATGAAAGCACTGATGATGAGGACCGACAGAGAATGAACAAATTAATGGAACTAGCAAATCTTCA
GCCCAAAAGACCTAAAACAATAAAGCAGCGCCATGTGAGGAAAAAGAGAAAAATAAAGGATATGTTGAATACACCTTTGT
GTCCTTCACACAGCAGTTTACATCCAGTGCTGTTACCTTCAGATGTATTTGACCAACCACAACCTGTAGGTAATAAAAGA
ATTGAATTCCATATATCTACCGACATGCCAGCTGCATTTAAGAAAGATTTAGAAAAGGAACAAAATTGTGAGGAAAAAAA
TCATGATTTACCTGCTACTGAAGTTGATGCATCCAATATAGGATTTGGAAAAATCTTCCCCAAACCTAATTTGGACATCA
CAGAGGAGATTAAAGAAGACTCTGATGAAATGCCATCAGAATGTATTTCTAGAAGGGAATTGGAAAAGGGCAGAATTTCT
AGAGAAGAAATGGAAACACTTTCAGTTTTCAGAAGTTATGAACCTGGTGAACCAAACTGTAGAATTTATGTAAAGAATTT
AGCTAAACATGTTGAAGAAAAGGTAGGTGTAAATTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 12 .33 RPM |
| SRP007412_cerebellum | 19 .21 RPM |
| SRP007412_heart | 4 .27 RPM |
| SRP007412_kidney | 14 .35 RPM |
| SRP007412_liver | 7 .37 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000035686 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000185946 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000018039 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000012013 | possible_ortholog | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000015566 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000033902 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_2224 | 84.91 | 71.69 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000001102 retrocopies