Parental gene:

CRYZ, ENSPPYG00000001235

Aliases:None
Description:quinone oxidoreductase [Source:RefSeq peptide;Acc:NP_001126904]
Organism:Orangutan (Pongo abelii)
Coordinates:1:154441084..154470723(+)


>ENSPPYG00000001235
ATGGCAACCGGACAGAAGTTGATGAGAGCTGTTAGAGTTTTTGAATTTGGTGGACCAGAAGTCCTGAAATTGCAATCAGA
TATTGCAGTACCGATTCCAAAAGACCATCAGGTTCTAATCAAGGTCCATGCATGTGGTGTCAACCCTGTGGAGACATACA
TTCGCTCTGGTACTTATAGTAGAAAACCCCTCTTACCCTATACTCCTGGCTCAGATGTGGCTGGGGTGATAGAAGCTGTT
GGAGGTAATGCATCTGCTTTCAAGAAAGGTGACAGAGTTTTCACTAGCAGCACGATCTCTGGGGGCTATGCAGAGTACGC
TCTTGCAGCAGACCACACTGTTTACAAACTACCTGAAAAACTGGATTTTAAACAAGGAGCTGCCATCGGTATCCCATATT
TTACTGCTTATCGAGCTCTGATCCACAGTGCCCATGTGAAAGCTGGAGAAAGTGTTCTGGTTCATGGGGCGAGTGGAGGA
GTTGGATTAGCAGCATGCCAAATTGCTAGAGCTTATGGCTTAAAGGTTTTGGGCACTGCTGGTACTGAGGAAGGACAAAA
GATTGTTTTGCAAAATGGAGCCCATGAAGTGTTCAATCACAGAGAAGTGAATTATATTGATAAAATTAAGAAATATGTTG
GTGAGAAAGGAATTGATGTAATTATTGAAATGTTAGCTAATGTAAATCTTAATAAAGACTTGAGTCTTCTGTCACATGGA
GGACAAGTGATAGTTGTTGGCAGCAGAGGTACTATTGAAATAAACCCACGGGACACCATGGCAAAGGAGTCGAGTATAAT
TGGAGTTACTGTCTTTTCCTCAACCAAGGAGGAATTTCAGCAATATGCAGCAGCCCTTCAAGCTGGAATGGAAATTGGCT
GGTTGAAACCTGTAATAGGTTCTCAATATCCATTGGAGAAGGTGGCCGAGGCTCATGAAAATATCATTCATGGCAGTGGG
GCTACTGGAAAAATGATTCTTCTCTTATGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 23 .00 RPM
SRP007412_cerebellum 18 .85 RPM
SRP007412_heart 31 .70 RPM
SRP007412_kidney 147 .57 RPM
SRP007412_liver 153 .90 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000003162 ortholog_one2one 1 retrogene
retro_btau_1433,
Canis familiaris ENSCAFG00000020404 ortholog_one2many 1 retrogene
retro_cfam_870,
Choloepus hoffmanni ENSCHOG00000005167 ortholog_one2one 1 retrogene
retro_chof_1772,
Felis catus ENSFCAG00000030626 ortholog_one2many 1 retrogene
retro_fcat_1907,
Homo sapiens ENSG00000116791 ortholog_one2one 1 retrogene
retro_hsap_3884,
Loxodonta africana ENSLAFG00000011371 ortholog_one2one 1 retrogene
retro_lafr_527,
Macaca mulatta ENSMMUG00000014593 ortholog_one2one 2 retrogenes
retro_mmul_1026, retro_mmul_1728,
Mustela putorius furo ENSMPUG00000010969 ortholog_one2many 1 retrogene
retro_mputfur_119,
Mus musculus ENSMUSG00000028199 ortholog_one2one 1 retrogene
retro_mmus_1314,
Nomascus leucogenys ENSNLEG00000009543 ortholog_one2one 2 retrogenes
retro_nleu_1890, retro_nleu_3115,
Otolemur garnettii ENSOGAG00000011586 ortholog_one2many 1 retrogene
retro_ogar_179,
Pongo abelii ENSPPYG00000000475 within_species_paralog 1 retrogene
retro_pabe_2539,
Pan troglodytes ENSPTRG00000000865 ortholog_one2one 1 retrogene
retro_ptro_1598,
Tupaia belangeri ENSTBEG00000016750 ortholog_one2one 3 retrogenes
retro_tbel_1665, retro_tbel_2353, retro_tbel_3800,
Tarsius syrichta ENSTSYG00000004193 ortholog_one2one 2 retrogenes
retro_tsyr_1218, retro_tsyr_1884,
Tursiops truncatus ENSTTRG00000010471 ortholog_one2one 2 retrogenes
retro_ttru_555, retro_ttru_958,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_1909 87.85 54.71
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2. retro_pabe_3165 72.93 54.41
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Download FASTA sequences of all ENSPPYG00000001235 retrocopies