Parental gene: | THRAP3, ENSPPYG00000001544 |
| Aliases: | None |
| Description: | thyroid hormone receptor associated protein 3 [Source:HGNC Symbol;Acc:22964] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 1:193885413..193901587(-) |
>ENSPPYG00000001544
ATGTCTTTTGCTCCCAAAACTGATTCTGAGAAGCCTTTTGGGCAAGCAGGTCAGTCTCCCAAAAGGTATAAGCTGCCGAG
GATGACCTTTGAGAAAATGACTGACTTCCACAAGGAGGAGATGGATGATCAAGATAAGGACAAAGCTAAGGGAAGGAAGG
AATCTGAGTTTGATGATGAACCCAAAATGTCTAAAGTCATAGGTGCAAACAAAAACCAGGAGGAGGAGAAGTCAGGCAAA
TGGGAGGGGAACCTGGTATATGCACCTCCAGGGAAGGAAAAGCAGAGGAAAACAGAGAGAGAGGAGGAGTCTTTCCCAGA
GAGATCCAAAGAAGATCGGGGCAAGAGAAGCGAAGGGCACAGGGGCTTTCCTGAGAAGAATTTCCGGAGTCCTTATAAAG
CAGTCCAGGAGAAAAGCTCATCACCTCCCCCAAGAAAGACCTCTGAGAGCCGAGACAAGCTGGGAGCGAAAGGAGATTTT
CCCGGGAAGTCTTCCTTTTCCATTACTCGAGAGGCACAGGTCAATGTCCGGATGGACTCTTTTGATGAGGACCTCGCACG
ACCCAGTGGCTTATTGGCTCAGGAACGCAAGTGCCGAGATCTAGTTCATAGCAACAAAAAGGAACAGGAGTTTCGTTCCA
TTTTCCAGCACATACAATCAGCTCAGCAGCGTAGCCCCTCAGAACTGTTTGCCCAACATATAGTGACCATTGTTCACCAT
GTTAAAGCCATCACTTTGGGGTCCTCAGGAATGACATTACATGAACGCTTTACTAAATACCTAAAGAGAGGAACTGAGCA
GGAGGCAGCCAAAAAACCAAGAAAAGCCCAAGAGATACATCAGACAGGAATAGACATTTCCCCCAGTACATTCAGAAAAC
ATGGTTTGGCTCATGATGAAATGAAAAGTCCCCGGGAACCTGGCTACAAGGCTGAGGGAAAATACAAAGATGATCCTGTT
GATCTCCGCCTTGATATTGAACGTCGTAAAAAACATAAGGAGAGAGATCTTAAACGAGGTAAATCGAGAGAATCAGTGGA
TTCCCGAGACTCCAGCCACTCAAGGGAAAGGTCAGCTGAAAAAACAGAGAAAACTCATAAAGGATCAAAGAAACAGAAGA
AGCATCGGAGAGCAAGAGACAGGTCCAGATCCTCCTCCTCTTCCTCCCAGTCATCTCACTCCTACAAAGCAGAAGAGTAC
ACTGAAGAGACAGAGGAAAGAGAGGAGAGCACCACGGGCTTTGACAAATCAAGACTGGGGACCAAAGACTTTGTGGGTCC
AAGTGAAAGAGGAGGTGGCAGAGCTCGAGGAACCTTTCAGTTTCGAGCCAGAGGAAGAGGCTGGGGCAGAGGCAACTACT
CTGGGAACAATAACAACAACAGCAACAATGATTTTCAAAAAAGAAACCGGGAAGAGGAGTGGGACCCAGAGTATACACCC
AAAAGCAAGAAGTATTACTTGCATGATGACCGTGAAGGTGAAGGCAGTGACAAGTGGGTGAGCCGGGGCCGGGGCCGAGG
AGCCTTTCCTCGGGGTCGGGGCCGGTTCATGTTCCGGAAATCAAGTACCAGTCCAAAGTGGGCCCATGACAAGTTCAGTG
GGGAGGAAGGGGAGATTGAAGACGACGAGAGTGGGACAGAGAACCGAGAAGAGAAGGACAATATACAGCCCACAACCGAG
TAG
ATGTCTTTTGCTCCCAAAACTGATTCTGAGAAGCCTTTTGGGCAAGCAGGTCAGTCTCCCAAAAGGTATAAGCTGCCGAG
GATGACCTTTGAGAAAATGACTGACTTCCACAAGGAGGAGATGGATGATCAAGATAAGGACAAAGCTAAGGGAAGGAAGG
AATCTGAGTTTGATGATGAACCCAAAATGTCTAAAGTCATAGGTGCAAACAAAAACCAGGAGGAGGAGAAGTCAGGCAAA
TGGGAGGGGAACCTGGTATATGCACCTCCAGGGAAGGAAAAGCAGAGGAAAACAGAGAGAGAGGAGGAGTCTTTCCCAGA
GAGATCCAAAGAAGATCGGGGCAAGAGAAGCGAAGGGCACAGGGGCTTTCCTGAGAAGAATTTCCGGAGTCCTTATAAAG
CAGTCCAGGAGAAAAGCTCATCACCTCCCCCAAGAAAGACCTCTGAGAGCCGAGACAAGCTGGGAGCGAAAGGAGATTTT
CCCGGGAAGTCTTCCTTTTCCATTACTCGAGAGGCACAGGTCAATGTCCGGATGGACTCTTTTGATGAGGACCTCGCACG
ACCCAGTGGCTTATTGGCTCAGGAACGCAAGTGCCGAGATCTAGTTCATAGCAACAAAAAGGAACAGGAGTTTCGTTCCA
TTTTCCAGCACATACAATCAGCTCAGCAGCGTAGCCCCTCAGAACTGTTTGCCCAACATATAGTGACCATTGTTCACCAT
GTTAAAGCCATCACTTTGGGGTCCTCAGGAATGACATTACATGAACGCTTTACTAAATACCTAAAGAGAGGAACTGAGCA
GGAGGCAGCCAAAAAACCAAGAAAAGCCCAAGAGATACATCAGACAGGAATAGACATTTCCCCCAGTACATTCAGAAAAC
ATGGTTTGGCTCATGATGAAATGAAAAGTCCCCGGGAACCTGGCTACAAGGCTGAGGGAAAATACAAAGATGATCCTGTT
GATCTCCGCCTTGATATTGAACGTCGTAAAAAACATAAGGAGAGAGATCTTAAACGAGGTAAATCGAGAGAATCAGTGGA
TTCCCGAGACTCCAGCCACTCAAGGGAAAGGTCAGCTGAAAAAACAGAGAAAACTCATAAAGGATCAAAGAAACAGAAGA
AGCATCGGAGAGCAAGAGACAGGTCCAGATCCTCCTCCTCTTCCTCCCAGTCATCTCACTCCTACAAAGCAGAAGAGTAC
ACTGAAGAGACAGAGGAAAGAGAGGAGAGCACCACGGGCTTTGACAAATCAAGACTGGGGACCAAAGACTTTGTGGGTCC
AAGTGAAAGAGGAGGTGGCAGAGCTCGAGGAACCTTTCAGTTTCGAGCCAGAGGAAGAGGCTGGGGCAGAGGCAACTACT
CTGGGAACAATAACAACAACAGCAACAATGATTTTCAAAAAAGAAACCGGGAAGAGGAGTGGGACCCAGAGTATACACCC
AAAAGCAAGAAGTATTACTTGCATGATGACCGTGAAGGTGAAGGCAGTGACAAGTGGGTGAGCCGGGGCCGGGGCCGAGG
AGCCTTTCCTCGGGGTCGGGGCCGGTTCATGTTCCGGAAATCAAGTACCAGTCCAAAGTGGGCCCATGACAAGTTCAGTG
GGGAGGAAGGGGAGATTGAAGACGACGAGAGTGGGACAGAGAACCGAGAAGAGAAGGACAATATACAGCCCACAACCGAG
TAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 81 .11 RPM |
| SRP007412_cerebellum | 86 .94 RPM |
| SRP007412_heart | 42 .11 RPM |
| SRP007412_kidney | 101 .96 RPM |
| SRP007412_liver | 66 .10 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000003389 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000017032 | within_species_paralog | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000009977 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_2336 | 79.33 | 51.79 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000001544 retrocopies