Parental gene: | CSGALNACT2, ENSPPYG00000002209 |
| Aliases: | None |
| Description: | chondroitin sulfate N-acetylgalactosaminyltransferase 2 [Source:HGNC Symbol;Acc:24292] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 10:41703030..41752802(+) |
>ENSPPYG00000002209
ATGCCTAGAAGAGGACTGATTCTTCACACCCGGACCCACTGGTTGCTGTTGGGCCTCGCTTTGCTCTGCAGTTTGATATT
ATTTATGTACCTCCTGGAATGTGCCCCCCAGACTGATGGAAATGCATCTCTTCCTGGTGTTGTTGGGGAAAATTATGGTA
AAGAGTATTATCAAGCCCTCCTACAGGAACAAGAAGAACATTATCAGACCAGGGCAACCAGTCTGAAACGCCAAATTGCC
CAACTAAAACAAGAACTACAAGAAATGAGTGAGAAGATGAGGTCATTGCAAGAAAGAAAGAATGTAGGGGCTAATGGCAT
AGGCTATCAGAGCAACAAAGAGCAAGCACCTAGTGATCTTTTAGAGTTTCTTCATTCCCAAATTGACAAAGCTGAAGTTA
GCATAGGGGCCAAACTACCCAGTGAGTATGGGGTCATTCCCTTTGAAAGTTTTACCTTAATGAAAGTATTTCAATTGGAA
ATGGGTCTCACTCGCCATCCTGAAGAAAAGCCGGTTAGAAAAGACAAACGAGATGAATTGGTGGAAGTTATTGAAGCGGG
CTTGGAGGTCATTAATAATCCCGATGAAGATGATGAACAAGAAGATGAGGAGGGTCCCCTTGGAGAGAAACTGATATTTA
ATGAAAATGACTTCGTAGAAGGTTATTATCGCACTGAGAGAGATAAGGGCACGCAGTATGAACTCTTTTTTAAGAAAGCA
GACCTTATGGAATATAGACATGTGACCCTCTTCCGCCCTTTTGGACCTCTCATGAAAGTGAAGAGTGAGATGATTGACAT
CACTAGATCAATTATTAATATCATTGTGCCACTTGCTGAAAGAACTGAAGCATTTGTACAGTTTATGCAGAACTTCAGGG
ATGTTTGTATTCATCAAGACAAGAAGATTCATCTCACAGTGGTGTATTTTGGTAAAGAAGGACTGTCTAAAGTCAAGTCT
GTCCTAGAATCTGTCACAAGTGAGTCTAATTTTCACAATTACACCTTGGTCTCATTGAATGAAGAATTTAATCGTGGACG
AGGACTAAATGTGGGTGCCCGAGCTTGGGACAAGGGAGAGGTCTTGATGTTTTTCTGTGATGTTGATATCTATTTCTCAG
CCGAATTCCTTAACAGCTGCCGGTTAAATGCTGAGCCAGGTAAGAAGGTGTTTTACCCCGTGGTGTTCAGTCTTTACAAT
CCTGCCATTGTTTATGCCAACCAGGAAGTGCCACCACCTGTGGAGCAGCAGCTGGTTCACAAAAAGGATTCTGGCTTTTG
GCGAGATTTTGGCTTTGGAATGACTTGTCAGTATCGTTCAGATTTCCTGACCATTGGTGGATTTGACATGGAAGTGAAAG
GTTGGGGTGGAGAAGATGTTCATCTTTATCGAAAATACTTACATGGTGACCTCATTGTAATTCGGACTCCGGTTCCTGGT
CTTTTCCACCTCTGGCATGAAAAGCGCTGTGCTGATGAGCTGACCCCGGAGCAGTACCGCATGTGCATCCAGTCTAAAGC
CATGAATGAGGCCTCTCACTCCCACCTGGGAATGCTGGTCTTCAGGGAGGAAATAGAGACGCATCTTCATAAACAGGCAT
ACAGGACAAACAGTGAAGCTGTTGGTTGA
ATGCCTAGAAGAGGACTGATTCTTCACACCCGGACCCACTGGTTGCTGTTGGGCCTCGCTTTGCTCTGCAGTTTGATATT
ATTTATGTACCTCCTGGAATGTGCCCCCCAGACTGATGGAAATGCATCTCTTCCTGGTGTTGTTGGGGAAAATTATGGTA
AAGAGTATTATCAAGCCCTCCTACAGGAACAAGAAGAACATTATCAGACCAGGGCAACCAGTCTGAAACGCCAAATTGCC
CAACTAAAACAAGAACTACAAGAAATGAGTGAGAAGATGAGGTCATTGCAAGAAAGAAAGAATGTAGGGGCTAATGGCAT
AGGCTATCAGAGCAACAAAGAGCAAGCACCTAGTGATCTTTTAGAGTTTCTTCATTCCCAAATTGACAAAGCTGAAGTTA
GCATAGGGGCCAAACTACCCAGTGAGTATGGGGTCATTCCCTTTGAAAGTTTTACCTTAATGAAAGTATTTCAATTGGAA
ATGGGTCTCACTCGCCATCCTGAAGAAAAGCCGGTTAGAAAAGACAAACGAGATGAATTGGTGGAAGTTATTGAAGCGGG
CTTGGAGGTCATTAATAATCCCGATGAAGATGATGAACAAGAAGATGAGGAGGGTCCCCTTGGAGAGAAACTGATATTTA
ATGAAAATGACTTCGTAGAAGGTTATTATCGCACTGAGAGAGATAAGGGCACGCAGTATGAACTCTTTTTTAAGAAAGCA
GACCTTATGGAATATAGACATGTGACCCTCTTCCGCCCTTTTGGACCTCTCATGAAAGTGAAGAGTGAGATGATTGACAT
CACTAGATCAATTATTAATATCATTGTGCCACTTGCTGAAAGAACTGAAGCATTTGTACAGTTTATGCAGAACTTCAGGG
ATGTTTGTATTCATCAAGACAAGAAGATTCATCTCACAGTGGTGTATTTTGGTAAAGAAGGACTGTCTAAAGTCAAGTCT
GTCCTAGAATCTGTCACAAGTGAGTCTAATTTTCACAATTACACCTTGGTCTCATTGAATGAAGAATTTAATCGTGGACG
AGGACTAAATGTGGGTGCCCGAGCTTGGGACAAGGGAGAGGTCTTGATGTTTTTCTGTGATGTTGATATCTATTTCTCAG
CCGAATTCCTTAACAGCTGCCGGTTAAATGCTGAGCCAGGTAAGAAGGTGTTTTACCCCGTGGTGTTCAGTCTTTACAAT
CCTGCCATTGTTTATGCCAACCAGGAAGTGCCACCACCTGTGGAGCAGCAGCTGGTTCACAAAAAGGATTCTGGCTTTTG
GCGAGATTTTGGCTTTGGAATGACTTGTCAGTATCGTTCAGATTTCCTGACCATTGGTGGATTTGACATGGAAGTGAAAG
GTTGGGGTGGAGAAGATGTTCATCTTTATCGAAAATACTTACATGGTGACCTCATTGTAATTCGGACTCCGGTTCCTGGT
CTTTTCCACCTCTGGCATGAAAAGCGCTGTGCTGATGAGCTGACCCCGGAGCAGTACCGCATGTGCATCCAGTCTAAAGC
CATGAATGAGGCCTCTCACTCCCACCTGGGAATGCTGGTCTTCAGGGAGGAAATAGAGACGCATCTTCATAAACAGGCAT
ACAGGACAAACAGTGAAGCTGTTGGTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 16 .37 RPM |
| SRP007412_cerebellum | 23 .71 RPM |
| SRP007412_heart | 8 .88 RPM |
| SRP007412_kidney | 10 .94 RPM |
| SRP007412_liver | 13 .74 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000169826 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000012462 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_3679 | 90.22 | 58.12 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000002209 retrocopies