Parental gene: | PHB2, ENSPPYG00000004214 |
| Aliases: | None |
| Description: | prohibitin-2 [Source:RefSeq peptide;Acc:NP_001125603] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 12:7201347..7206550(-) |
>ENSPPYG00000004214
ATGGCCCAGAACTTGAAGGACTTGGCGGGACGGCTGCCCGCCGGGCCCCGGGGCATGGGCACGGCCCTGAAGCTGTTGCT
GGGGGCCGGCGCCGTGGCCTACGGTGTGCGCGAATCCGTGTTCACCGTGGAAGGCGGGCACAGAGCCATCTTCTTCAATC
GGATCGGTGGAGTGCAGCAGGACACTATCCTGGCCGAGGGCCTTCACTTCAGGATCCCTTGGTTCCAGTACCCCATTATC
TATGACATTCGGGCCAGACCTCGAAAAATCTCCTCCCCTACAGGCTCCAAAGACCTACAGATGGTGAATATCTCCCTGCG
AGTGTTGTCTCGACCGAATGCTCAGGAGCTTCCTAGCATGTACCAGCGCCTAGGGCTGGACTATGAGGAACGAGTGTTGC
CGTCCATTGTCAACGAGGTGCTCAAGAGTGTGGTGGCCAAGTTCAATGCCTCGCAGCTGATCACCCAGCGGGCCCAGGTA
TCCCTGTTGATCCGCCGGGAGCTGACAGAGAGGGCCAAGGACTTCAGCCTCATCCTGGATGATGTGGCCATCACAGAGCT
GAGCTTTAGCCGAGAGTACACAGCTGCTGTAGAAGCCAAACAAGTGGCCCAGCAGGAGGCCCAGCGGGCCCAATTCTTGG
TAGAAAAAGCAAAGCAGGAACAGCGGCAGAAGATTGTGCAGGCTGAGGGTGAGGCCGAGGCTGCCAAGATGCTTGGAGAA
GCACTGAGCAAGAACCCTGGCTACATCAAACTTCGCAAGATTCGAGCAGCCCAGAATATCTCCAAGACGATCGCCACATC
ACAGAATCGTATCTATCTCACGGCTGACAACCTTGTGCTGAACCTACAGGATGAAAGTTTCACCAGAGGAAGTGACAGCC
TCATCAAGGGTAAGAAATGA
ATGGCCCAGAACTTGAAGGACTTGGCGGGACGGCTGCCCGCCGGGCCCCGGGGCATGGGCACGGCCCTGAAGCTGTTGCT
GGGGGCCGGCGCCGTGGCCTACGGTGTGCGCGAATCCGTGTTCACCGTGGAAGGCGGGCACAGAGCCATCTTCTTCAATC
GGATCGGTGGAGTGCAGCAGGACACTATCCTGGCCGAGGGCCTTCACTTCAGGATCCCTTGGTTCCAGTACCCCATTATC
TATGACATTCGGGCCAGACCTCGAAAAATCTCCTCCCCTACAGGCTCCAAAGACCTACAGATGGTGAATATCTCCCTGCG
AGTGTTGTCTCGACCGAATGCTCAGGAGCTTCCTAGCATGTACCAGCGCCTAGGGCTGGACTATGAGGAACGAGTGTTGC
CGTCCATTGTCAACGAGGTGCTCAAGAGTGTGGTGGCCAAGTTCAATGCCTCGCAGCTGATCACCCAGCGGGCCCAGGTA
TCCCTGTTGATCCGCCGGGAGCTGACAGAGAGGGCCAAGGACTTCAGCCTCATCCTGGATGATGTGGCCATCACAGAGCT
GAGCTTTAGCCGAGAGTACACAGCTGCTGTAGAAGCCAAACAAGTGGCCCAGCAGGAGGCCCAGCGGGCCCAATTCTTGG
TAGAAAAAGCAAAGCAGGAACAGCGGCAGAAGATTGTGCAGGCTGAGGGTGAGGCCGAGGCTGCCAAGATGCTTGGAGAA
GCACTGAGCAAGAACCCTGGCTACATCAAACTTCGCAAGATTCGAGCAGCCCAGAATATCTCCAAGACGATCGCCACATC
ACAGAATCGTATCTATCTCACGGCTGACAACCTTGTGCTGAACCTACAGGATGAAAGTTTCACCAGAGGAAGTGACAGCC
TCATCAAGGGTAAGAAATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 44 .73 RPM |
| SRP007412_cerebellum | 40 .25 RPM |
| SRP007412_heart | 40 .49 RPM |
| SRP007412_kidney | 85 .25 RPM |
| SRP007412_liver | 86 .79 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000013760 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000014439 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000007137 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000215021 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000004281 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000010205 | ortholog_one2many | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000005021 | ortholog_one2many | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000012999 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_419 | 94.98 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_557 | 73.83 | 83.95 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_559 | 65.52 | 83.95 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000004214 retrocopies