Parental gene: | NFYB, ENSPPYG00000004892 |
| Aliases: | None |
| Description: | nuclear transcription factor Y, beta [Source:HGNC Symbol;Acc:7805] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 12:105865402..105878115(-) |
>ENSPPYG00000004892
ATGGATGGTGACAGTTCTACAACAGATGCTTCTCAACTAGGAATCTCTGCAGACTATATTGGAGGAAGTCATTATGTTAT
ACAGCCTCATGATGATACTGAGGACAGCATGAATGATCATGAAGACACAAATGGTTCAAAAGAAAGTTTCAGAGAACAAG
ATATATATCTTCCAATAGCAAACGTGGCTAGGATAATGAAAAATGCCATACCTCAAACGGGAAAGATTGCAAAAGATGCC
AAAGAATGTGTTCAAGAATGTGTAAGTGAGTTCATCAGTTTTATAACATCTGAAGCAAGTGAAAGGTGCCATCAAGAGAA
ACGGAAAACAATCAATGGAGAAGATATTCTCTTTGCTATGTCTACTTTAGGCTTTGACAGTTATGTGGAACCTCTGAAAT
TATACCTTCAGAAATTCAGAGAGGCTATGAAAGGAGAAAAGGGAATTGGTGGAGCAGTCACAGCTACAGATGGACTAAGT
GAAGAGCTTACAGAGGAGGCATTTACTAACCAGTTACCAGCTGGCTTAATAACCACAGACGGAAAAACAACAAAATGTTA
TGGTTTACACAACATCATATCAATAGATTTCTGGTGTTCAACAAATTCAGTTTTCATGATCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 10 .23 RPM |
| SRP007412_cerebellum | 16 .66 RPM |
| SRP007412_heart | 9 .12 RPM |
| SRP007412_kidney | 12 .93 RPM |
| SRP007412_liver | 7 .68 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000014610 | possible_ortholog | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000003213 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000009984 | ortholog_one2one | 3 retrogenes | |
| Felis catus | ENSFCAG00000026471 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000005468 | ortholog_one2one | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000008117 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_2201 | 81.15 | 57.97 | Please wait, loading  |
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| 2. | retro_pabe_2803 | 51.39 | 69.08 | Please wait, loading |
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| 3. | retro_pabe_3319 | 67.39 | 65.70 | Please wait, loading |
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Download FASTA sequences of all ENSPPYG00000004892 retrocopies