Parental gene:

RFC3, ENSPPYG00000005272

Aliases:None
Description:replication factor C (activator 1) 3, 38kDa [Source:HGNC Symbol;Acc:9971]
Organism:Orangutan (Pongo abelii)
Coordinates:13:33452709..33473202(+)


>ENSPPYG00000005272
ATGAGCCTCTGGGTGGACAAGTATCGGCCCTGCTCCTTGGGACGGCTGGACTATCACAAGGAGCAGGCGGCCCAGCTGCG
GAACCTGGTGCAGTGTGGTGACTTTCCTCATCTGTTAGTGTATGGACCATCAGGTGCTGGAAAAAAGACAAGAATTATGT
GTATTCTACGTGAACTTTATGGTGTTGGAGTGGAAAAATTGAGAATTGAACATCAGACGATCACAACTCCATCTAAAAAA
AAAATTGAAATTAGCACCATTGCAAGTAACTACCACCTTGAAGTTAATCCTAGTGATGCTGGAAATAGTGACCGAGTAGT
CGTTCAGGAGATGTTGAAAACAGTGGCACAATCACAACAACTTGAAACAAACTCTCAAAGGGATTTTAAAGTGGTATTAT
TGACAGAAGTTGACAAACTCACCAAAGATGCTCAGCATGCCTTGCGAAGAACCATGGAAAAATATATGTCTACCTGCAGA
TTGATCTTGTGCTGCAATTCTACATCTAAAGTGATCCCGCCTATTCGTAGTAGGTGCTTGGCGGTTCGTGTGCCTGCTCC
CAGCATTGAAGATATTTGCCATGTGTTATCTACTGTGTGCAAGAAGGAAGGTCTGAATCTTCCTTCACAACTGGCTCATA
GACTTGCAGAGAAGTCTTGTAGAAATCTCAGAAAAGCCCTGCTTATGTGTGAAGCCTGCAGAGTGCAACAATATCCTTTT
ACTGCAGATCAAGAAATCCCTGAGACAGATTGGGAGGTGTATCTGAGGGAGACTGCAAATGCTATTGTCAGTCAGCAAAC
TCCACAAAGGCTCCTTGAAGTTCGTGGAAGGCTGTATGAGCTTCTAACTCATTGTATTCCTCCTGAGATAATAATGAAGG
GCCTTCTCTCAGAACTGTTACATAATTGTGATGGACAACTGAAAGGGGAGGTGGCTCAAATGGCAGCTTATTATGAACAT
CGTCTACAGCTGGGTAGCAAAGCCATTTATCACTTGGAAGCGTTTGTGGCCAAATTCATGGCACTTTATAAGAAGTTCAT
GGAGGATGGATTGGAAGGCATGATGTTCTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 2 .60 RPM
SRP007412_cerebellum 10 .21 RPM
SRP007412_heart 2 .08 RPM
SRP007412_kidney 1 .69 RPM
SRP007412_liver 1 .74 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000018380 ortholog_one2one 1 retrogene
retro_cjac_1611,
Cavia porcellus ENSCPOG00000008739 ortholog_one2one 1 retrogene
retro_cpor_405,
Myotis lucifugus ENSMLUG00000014088 ortholog_one2one 1 retrogene
retro_mluc_1754,
Mustela putorius furo ENSMPUG00000001885 ortholog_one2one 1 retrogene
retro_mputfur_1073,
Nomascus leucogenys ENSNLEG00000001169 ortholog_one2one 1 retrogene
retro_nleu_674,
Tupaia belangeri ENSTBEG00000004725 ortholog_one2one 1 retrogene
retro_tbel_4191,
Tarsius syrichta ENSTSYG00000009501 ortholog_one2one 2 retrogenes
retro_tsyr_1772, retro_tsyr_331,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_2420 74.46 64.33
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Download FASTA sequences of all ENSPPYG00000005272 retrocopies