Parental gene:

MRPS31, ENSPPYG00000005306

Aliases:None
Description:mitochondrial ribosomal protein S31 [Source:HGNC Symbol;Acc:16632]
Organism:Orangutan (Pongo abelii)
Coordinates:13:40657857..40707564(-)


>ENSPPYG00000005306
ATGTTTCCCAGAGTCTCGACGTTCCTACCTCTTCGCCTCCTTTCCCGCCACCCTTTGTCCTCTGGAAGCCCGGAGACATC
AGCGGCTGCGATTATGCTACTCGCTGTTCGGCACGGAACAGTCAGGACAAAAAATAACATCCAAAGATATTTTGGCACTA
ACAGCGTGATCTGTAGCAAGAAAGATAAGCAGTCTGTTCGAACTGATGAGACTTCCAAGGAGACTTCAGAGAGCCAAGAC
GGTGAAAAGGAAAATACGAAAAAAGACTTGTTAGGCATTATTAAGGGCATGAAAGTTGAATTAAGCACAGTAAATGTACA
AACAACAAAGCCCCCCAAAAGAAGACCACTTAAAAGTTTGGAAACTACAGTTGGCAGGCTTCGAAGAGCTACAGAATATG
CTCCAAAGAAGAGAATTGAGCCCCTGAGTCCTGAGTTGGTGGCAGCTGCATCTGCTGTGGCAGATTCTCTCCCTTTTGAT
AAGCAAACAACCAAGTCAGAGCTGCTGAGCCAGCTGCAGCAGCATGAGGAAGAGTCAAGGGCACAGAGAGATGCAGAGCG
ACCTAAAATTAGTTTCAGTAACATAATATCAGATATGAAAGTTGCCAGATCTGCTACAGCTAGAGTTCGTTCAAGACCAG
AGCTTCAGATTCAGTTTGATGAAGGCTATGACAATTATCCTGGCCAGGAGGAGACCGATGATCATAAAAAAAGGAAAAAT
ATATTCAGAGGGAAAAGACTTAATATTTTTGACATGATGGCAGTTACTAAAGAAGCACCTGAAACAGACACATCACCTTC
ACTTTGGGATGTGGAGTTTGCTAAGCAGTTAGCCACAGTAAATGAACAACCCCTTCAGAATGGATTTGAAGAGCTGATCC
AGTGGACAAAAGAGGGGAAACTATGGGAGTTCCCAATTAACAATGAAGCAGGTTTTGATGATGATGGTTCAGAATTTCAT
GAACATATATTTCTGGAGAAACACCTGGAGAGCTTTCCAAAACAAGGACCAATTCGCCACTTCATGGAGCTGGTGACTTG
TGGCCTTTCCAAAAACCCATATCTTAGTGTTAAACAGAAGGTTGAGCACATAGAGTGGTTTAGAAATTATTTTAATGAAA
AAAAGGATATTCTAAAAGAAAGTAACATACAGTTCAATTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 7 .80 RPM
SRP007412_cerebellum 12 .16 RPM
SRP007412_heart 6 .11 RPM
SRP007412_kidney 9 .48 RPM
SRP007412_liver 10 .74 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000008470 ortholog_one2one 1 retrogene
retro_chof_586,
Equus caballus ENSECAG00000003600 ortholog_one2one 1 retrogene
retro_ecab_1028,
Nomascus leucogenys ENSNLEG00000001164 ortholog_one2one 1 retrogene
retro_nleu_1999,
Oryctolagus cuniculus ENSOCUG00000021467 ortholog_one2one 1 retrogene
retro_ocun_1747,
Otolemur garnettii ENSOGAG00000024374 ortholog_one2many 1 retrogene
retro_ogar_914,
Ochotona princeps ENSOPRG00000014606 ortholog_one2one 1 retrogene
retro_opri_1137,
Sorex araneus ENSSARG00000004428 ortholog_one2one 1 retrogene
retro_sara_594,
Sarcophilus harrisii ENSSHAG00000007140 ortholog_one2one 1 retrogene
retro_shar_591,
Tarsius syrichta ENSTSYG00000002170 ortholog_one2one 1 retrogene
retro_tsyr_238,
Tursiops truncatus ENSTTRG00000012556 ortholog_one2one 1 retrogene
retro_ttru_1285,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_3785 79.94 91.19
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Download FASTA sequences of all ENSPPYG00000005306 retrocopies