Parental gene: | FAM64A, ENSPPYG00000007877 |
| Aliases: | None |
| Description: | family with sequence similarity 64, member A [Source:HGNC Symbol;Acc:25483] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 17:6445556..6450481(+) |
>ENSPPYG00000007877
ATGGCTTCTCGGTGGCAGAGCATGGGGACCTCCGTGCACCGGAGATCTCTCCAGCACCAGGAGCAGCTGGAGGACAGCAA
GGAGCTGCAGCCTGTGGTCGGCCATCAGGAGACCTCCGCAGGGGCCCTGGGGTCCCTGTGCAGACAATTCCAAAGGAGGC
TGCCCCTGAGAGCCGTCAACCTCAACCTCCGCGCAGGGCCCTCCTGGAAACGCCTGGAAACCCCAGAGCCAGGTCAGCAG
GGCCTCCAGGCTGCAGCTCGCTCAGCTAAGAGTGCTTTGGGTGCCGTGTCCCAGAGAATCCAGGAGTCCTGCCAAAGTGG
CACCAAGTGGCTGGTGGAGACCCAGGTGAAGGCCAGGAGGCGGAAGAGAGGAGCACAGAAGGGCAGTGGATCCCCAACTC
ACAGCCTGAGCCAGAAGAGCACCCGGCTGTCTGTCGCCGCCCCTGCTCACTCAGCCGCAGACCCCTGGGAGAAGGAACAT
CACCACCTCTCTGCCCGGATGGGCTTACGTGCCCACCCATTACGGCGATCAAGGCGGGAGGCTGCCTTCCGGAGCCCCTA
CTCCTCAACAGAGCCCCTCTGCTCTCCCAGCGAGTCTGACAGTGACCTAGAGCCTGTGGGGGCAGGAATTCAGCATCTCC
AGAAGCTGTCCCAAGAGCTAGATGAAGCCATTATGGCAGAAGAGAGTGGTGACATCGTCTATCTCATTCATGACTGA
ATGGCTTCTCGGTGGCAGAGCATGGGGACCTCCGTGCACCGGAGATCTCTCCAGCACCAGGAGCAGCTGGAGGACAGCAA
GGAGCTGCAGCCTGTGGTCGGCCATCAGGAGACCTCCGCAGGGGCCCTGGGGTCCCTGTGCAGACAATTCCAAAGGAGGC
TGCCCCTGAGAGCCGTCAACCTCAACCTCCGCGCAGGGCCCTCCTGGAAACGCCTGGAAACCCCAGAGCCAGGTCAGCAG
GGCCTCCAGGCTGCAGCTCGCTCAGCTAAGAGTGCTTTGGGTGCCGTGTCCCAGAGAATCCAGGAGTCCTGCCAAAGTGG
CACCAAGTGGCTGGTGGAGACCCAGGTGAAGGCCAGGAGGCGGAAGAGAGGAGCACAGAAGGGCAGTGGATCCCCAACTC
ACAGCCTGAGCCAGAAGAGCACCCGGCTGTCTGTCGCCGCCCCTGCTCACTCAGCCGCAGACCCCTGGGAGAAGGAACAT
CACCACCTCTCTGCCCGGATGGGCTTACGTGCCCACCCATTACGGCGATCAAGGCGGGAGGCTGCCTTCCGGAGCCCCTA
CTCCTCAACAGAGCCCCTCTGCTCTCCCAGCGAGTCTGACAGTGACCTAGAGCCTGTGGGGGCAGGAATTCAGCATCTCC
AGAAGCTGTCCCAAGAGCTAGATGAAGCCATTATGGCAGAAGAGAGTGGTGACATCGTCTATCTCATTCATGACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 0 .06 RPM |
| SRP007412_cerebellum | 0 .00 RPM |
| SRP007412_heart | 0 .24 RPM |
| SRP007412_kidney | 0 .00 RPM |
| SRP007412_liver | 0 .09 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000006997 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000129195 | ortholog_one2one | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000012309 | ortholog_one2one | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000017760 | ortholog_one2one | 3 retrogenes | |
| Mus musculus | ENSMUSG00000020808 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000009164 | ortholog_one2one | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000027433 | ortholog_one2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000008641 | ortholog_one2one | 3 retrogenes | |
| Rattus norvegicus | ENSRNOG00000008040 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_2141 | 84.94 | 99.58 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_2509 | 74.79 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_2545 | 82.23 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000007877 retrocopies