Parental gene: | NSRP1, ENSPPYG00000008130 |
| Aliases: | NSRP1, CCDC55 |
| Description: | nuclear speckle splicing regulatory protein 1 [Source:HGNC Symbol;Acc:25305] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 17:24901836..24968604(+) |
>ENSPPYG00000008130
ATGGCGATTCCGGGCAGGCAGTATGGGCTTATTTTGCCAAAGAAAACACAGCAGTTGCACCCTGTTTTGCAAAAACCATC
AGTGTTTGGGAATGATTCTGATGATGATGATGAGACCTCTGTGAGTGAAAGCCTTCAGAGGGAAGCTGCTAAAAAGCAGG
CCATGAAACAGACCAAACTGGAAATCCAGAAGGCCCTTGCAGAAGATGCTACTGTGTATGAATATGACAGTATTTATGAA
GAAATGCAGAAAAAAAAGGAGGAAAATAATCCCAAATTGCTTTTGGGGAAAGACAGAAAGCCCAAGTATATTCACAACTT
GCTAAAAGCAGTTGAGATCAGAAAAAAGGAACAGGAAAAAAGAATGGAAAAGAAAATACAGAGAGAACGAGAAATGGAAA
AGGGGGAGTTTGATGATAAAGAAGCATTTGTGACATCTGCATATAAGAAAAAACTGCAAGAGAGAGCTGAAGAAGAAGAA
AGAGAGAAGAGGGCTGCTGCACTGGAAGCATGTTTGGATGTAACCAAGCAGAAAGATCTCAGTGGATTTTATAGGCACCT
ATTAAATCAAGCAGTTGGTGAAGAGGAAGTACCTAAATGCAGCTTTCGTGAAGCCAGATCTGGTATAAAGGAAGAAAAAT
CAAAGGGCTACTCCAATGAAGTAAGTTCAAAAAACAGAATACCACAAGAGAAATGCGTTCTTCAAACTGATGTGAAAGTA
GAGGAAAACCCAGATGCAGACAGTGACTTTGATGCTAAGAGCAGTGAGGATGATGAAATAGAAGAAACTAGAGTGAACTG
CAGAAGGGAAAAGGTCATAGAGACCCCTGAGAATGACTCCAAGCACCACAGGAATCAAAACCACTCTCGGTCACCTAGTG
AAGAAAGAGGGCACAGTACCAGACACCACATGAAAGGATCACGAACGTCGAGAGGACACGAGAAAAGGGAAGATCAGCAC
CAACAGAAGCAATCCAGAGACCAAGAGAACCGTTACACTGACCGTGATTACCGGAAAGAAAGGGATTCTCATAGGCACAG
AGAGGCCAGTCATAGAGATTCCCATTGGAAGAGGCATGAACAGGAAGATAAACCAAGGGCGAGGGACCAAAGAGAAAGAA
GTGACAGAGTATGGAAAAGGGAGAAAGACAGGGAGAAATATTCCCAAAGAGAACAAGAAAGAGATAGACAACAAAATGAT
CAGAACCGACACAGTGAGAAAGGAGAGAAGGAAGAGAAAAGCAAAGCAAAGGAAGAGCATATGAAAGTAGGAAAGGAAAG
ATATGAAAATAATGATAAATACAGAGATAGAGAAAAACGAGAAGTAAGTGTTCAATCTTCAGAAAGAAATCGAGACAGAA
AGGAAAGCAGCCCACATTCTAGGGCAAAGGATAAATTTCTTGACCAAGAAAGATCCAACAAAATGAGAAACATGGCAAAG
GACAAAGAAAGAAACCAAGAGAAACCCTCTAATTCTGAATCATCACTGGGAGCAAAACACAGACTCACAGAGGAAAGGCA
AGAGAAGGGTAAAGAACAAGAGAGACCACCTGAGGCAGTGAGCAAGTTTGCAAAGCGGAACAACGAAGAAACTGTAATGT
CAGCTAGAGACAGGTACTTGGCCAGGCAGATGGCGCGGGTTAATGCAAAGACCTATATTGAGAAAGAAGATGATTGA
ATGGCGATTCCGGGCAGGCAGTATGGGCTTATTTTGCCAAAGAAAACACAGCAGTTGCACCCTGTTTTGCAAAAACCATC
AGTGTTTGGGAATGATTCTGATGATGATGATGAGACCTCTGTGAGTGAAAGCCTTCAGAGGGAAGCTGCTAAAAAGCAGG
CCATGAAACAGACCAAACTGGAAATCCAGAAGGCCCTTGCAGAAGATGCTACTGTGTATGAATATGACAGTATTTATGAA
GAAATGCAGAAAAAAAAGGAGGAAAATAATCCCAAATTGCTTTTGGGGAAAGACAGAAAGCCCAAGTATATTCACAACTT
GCTAAAAGCAGTTGAGATCAGAAAAAAGGAACAGGAAAAAAGAATGGAAAAGAAAATACAGAGAGAACGAGAAATGGAAA
AGGGGGAGTTTGATGATAAAGAAGCATTTGTGACATCTGCATATAAGAAAAAACTGCAAGAGAGAGCTGAAGAAGAAGAA
AGAGAGAAGAGGGCTGCTGCACTGGAAGCATGTTTGGATGTAACCAAGCAGAAAGATCTCAGTGGATTTTATAGGCACCT
ATTAAATCAAGCAGTTGGTGAAGAGGAAGTACCTAAATGCAGCTTTCGTGAAGCCAGATCTGGTATAAAGGAAGAAAAAT
CAAAGGGCTACTCCAATGAAGTAAGTTCAAAAAACAGAATACCACAAGAGAAATGCGTTCTTCAAACTGATGTGAAAGTA
GAGGAAAACCCAGATGCAGACAGTGACTTTGATGCTAAGAGCAGTGAGGATGATGAAATAGAAGAAACTAGAGTGAACTG
CAGAAGGGAAAAGGTCATAGAGACCCCTGAGAATGACTCCAAGCACCACAGGAATCAAAACCACTCTCGGTCACCTAGTG
AAGAAAGAGGGCACAGTACCAGACACCACATGAAAGGATCACGAACGTCGAGAGGACACGAGAAAAGGGAAGATCAGCAC
CAACAGAAGCAATCCAGAGACCAAGAGAACCGTTACACTGACCGTGATTACCGGAAAGAAAGGGATTCTCATAGGCACAG
AGAGGCCAGTCATAGAGATTCCCATTGGAAGAGGCATGAACAGGAAGATAAACCAAGGGCGAGGGACCAAAGAGAAAGAA
GTGACAGAGTATGGAAAAGGGAGAAAGACAGGGAGAAATATTCCCAAAGAGAACAAGAAAGAGATAGACAACAAAATGAT
CAGAACCGACACAGTGAGAAAGGAGAGAAGGAAGAGAAAAGCAAAGCAAAGGAAGAGCATATGAAAGTAGGAAAGGAAAG
ATATGAAAATAATGATAAATACAGAGATAGAGAAAAACGAGAAGTAAGTGTTCAATCTTCAGAAAGAAATCGAGACAGAA
AGGAAAGCAGCCCACATTCTAGGGCAAAGGATAAATTTCTTGACCAAGAAAGATCCAACAAAATGAGAAACATGGCAAAG
GACAAAGAAAGAAACCAAGAGAAACCCTCTAATTCTGAATCATCACTGGGAGCAAAACACAGACTCACAGAGGAAAGGCA
AGAGAAGGGTAAAGAACAAGAGAGACCACCTGAGGCAGTGAGCAAGTTTGCAAAGCGGAACAACGAAGAAACTGTAATGT
CAGCTAGAGACAGGTACTTGGCCAGGCAGATGGCGCGGGTTAATGCAAAGACCTATATTGAGAAAGAAGATGATTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 20 .02 RPM |
| SRP007412_cerebellum | 29 .79 RPM |
| SRP007412_heart | 23 .93 RPM |
| SRP007412_kidney | 31 .66 RPM |
| SRP007412_liver | 14 .41 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Monodelphis domestica | ENSMODG00000009868 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000008957 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000003513 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_457 | 87.25 | 70.79 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000008130 retrocopies