Parental gene:

VPS25, ENSPPYG00000008377

Aliases:None
Description:vacuolar protein sorting 25 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:28122]
Organism:Orangutan (Pongo abelii)
Coordinates:17:46647273..46654677(-)


>ENSPPYG00000008377
ATGGCGATGAGTTTCGAGTGGCCGTGGCAGTATCGCTTCCCACCCTTCTTTACGTTACAACCGAATGTGGACACTCGGCA
GAAGCAGCTGGCCGCCTGGTGCTCGCTGGTCCTGTCCTTCTGCCGCCTGCACAAACAGTCCAGCATGACGGTGATGGAAG
CTCAGGAGAGCCCGCTCTTCAACAACGTCAAGCTACAGCGAAAGCTTCCTGTGGAGTCGATCCAGATTGTATTAGAGGAA
CTGAGGAAGAAAGGACCTCGAGTGGTGGATAAGAGCAAGTCTAGCTTCCTGATCATGTGGCGGAGCCAGAAGATGGGGGA
ACTCATTTATCAGTGGGTTTCCAGGAGTGGCCAGAACAACTCCGTCTTTACCCTGTATGAACTGACTAATGGGGAAGACA
CAGAGGATGAGGAGTTCCATGGGCTGGATGAAGCCACTCTACTGCGGGCTCTGCAGGCCCTACAGCAGGAGCACAAGGCC
GAGATCATCACCGTCAGCGATGGCCGAGGCGTCAAGTTCTTC

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 8 .46 RPM
SRP007412_cerebellum 6 .69 RPM
SRP007412_heart 6 .44 RPM
SRP007412_kidney 23 .17 RPM
SRP007412_liver 17 .81 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000013276 ortholog_one2one 1 retrogene
retro_cjac_2959,
Homo sapiens ENSG00000131475 ortholog_one2one 1 retrogene
retro_hsap_213,
Gorilla gorilla ENSGGOG00000016041 ortholog_one2one 1 retrogene
retro_ggor_284,
Macropus eugenii ENSMEUG00000011611 ortholog_one2one 2 retrogenes
retro_meug_1247, retro_meug_1681,
Macaca mulatta ENSMMUG00000002149 ortholog_one2one 1 retrogene
retro_mmul_406,
Nomascus leucogenys ENSNLEG00000011797 ortholog_one2one 1 retrogene
retro_nleu_1862,
Ochotona princeps ENSOPRG00000012574 ortholog_one2one 1 retrogene
retro_opri_1071,
Pan troglodytes ENSPTRG00000009220 ortholog_one2one 2 retrogenes
retro_ptro_1624, retro_ptro_334,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_427 69.86 83.33
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Download FASTA sequences of all ENSPPYG00000008377 retrocopies