Parental gene:

CDK5RAP3, ENSPPYG00000008888

Aliases:None
Description:CDK5 regulatory subunit associated protein 3 [Source:HGNC Symbol;Acc:18673]
Organism:Orangutan (Pongo abelii)
Coordinates:17_random:11835976..11849614(+)


>ENSPPYG00000008888
ATGGAGGACCATCAGCACGTGCCCATCGACATCCAGACCAGCAAGCTGCTCGATTGGCTGGTGGACAGAAGGCACTGCAG
CCTGAAATGGCAGAGTCTGGTGCTGACGATCCGCGAGAAGATCAATGCTGCCATCCAGGATATGCCAGAGAGCGAAGAGA
TCGCCCAGCTGCTGTCTGGGTCCTACATTCACTACTTTCACTGCCTAAGAATCCTGGACCTTCTCAAAGGCACAGAGGCC
TCCACGAAAAATATTTTTGGCCGATACTCTTCACAGCGGATGAAGGATTGGCAGGAGATTATAGCCCTGTATGAGAAGGA
CAACACCTACTTAGTGGAACTCTCTAGCCTCCTGGTTCGGAATGTCAACTATGAGATCCCCTCACTGAAGAAGCAGATTG
CCAAGTGCCAGCAGCTGCAGCAAGAATACAGCCGCAAGGAGGAGGAGTGCCAGGCAGGGGCTGCCGAGATGCGGGAGCAG
TTCTACCACTCCTGCAAGCAGTATGGTATCATGGGCGAAAATGTCCGAGGAGAACTGCTGGCCCTGGTGAAGGACCTGCC
GAGTCAGCTGGCTGAGATTGGGGCAGCGGCTCAGCAGTCCCTGGGGGAAGCCATTGACGTGTACCAGGCGTCTGTGGGGT
TTGTGTGTGAGAGCCCCACAGAGCAGGTGTTGCCAATGCTGCAGTTCGTGCAGAAGCGGGGAAACTCAACGGTGTACGAG
TGGAGGACAGGGACAGAGCCCTCTGTGGTGGAGCGACCCCACCTCGAGGAGCTTCCGGAGCAGGTGGCAGAAGACGCGAT
TGACTGGGGCGACTTTGGGGTAGAGGCAGTGTCTGAGGGGACTGACTCTGGCATCTCTGCCGAGGCTGCTGGAATCGACT
GGGGCATCTTCCCGGAATCAGATTCAAAGGACCCTGGAGGTGATGGGATAGACTGGGGAGACGATGCTGTTGCTTTGCAG
ATCACAGTGCTGGAAGCGGGAACCCAGGCTCCAGAAGGTGTTGCCAGGGGCCCAGATGCCCTGACACTTCTTGAATACAC
TGAGACCCGGAATCAGTTCCTTGATGAACTCATGGAGCTTGAGATCTTCTTAGCCCAGAGAGCAGTGGAGTTGAGTGAGG
AGGCAGACGTCCTGTCTGTGAGCCAGTTCCAGCTGGCTCCAGCCATCCTGCAGGGTCAGACCAAAGAGAAGACGGTTACC
ATGGTGTCAGTGCTGGAGGATCTGATTGGCAAGCTTACCAGTCTTCAACTGCAACACCTGTTTATGATCCTGGCCTCACC
AAGGTATGTGGACCGAGTGACTGAATTCCTCCAGCAAAAGCTGAAGCAGTCCCAGTTGCTGGCTTTGAAGAAAGAGCTGA
TGGTGCAGAAGCAGCAGGAGGCACTTGAGGAGCAGGCAGCTCTGGAGCCTAAGCTGGACCTGCTGCTGGAGAAGACCAAG
GAGCTGCAGAAGCTGATTGAAGCTGACATCTCCAAGAGGTACAGCGGGCGCCCTGTGAACCTGATGGGAACCTCTCTGTG
A

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 36 .99 RPM
SRP007412_cerebellum 48 .52 RPM
SRP007412_heart 12 .70 RPM
SRP007412_kidney 46 .94 RPM
SRP007412_liver 34 .30 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000108465 ortholog_one2one 1 retrogene
retro_hsap_2466,
Gorilla gorilla ENSGGOG00000022994 ortholog_one2one 1 retrogene
retro_ggor_1535,
Nomascus leucogenys ENSNLEG00000002109 ortholog_one2one 1 retrogene
retro_nleu_2448,
Ochotona princeps ENSOPRG00000004107 ortholog_one2one 2 retrogenes
retro_opri_276, retro_opri_480,
Pan troglodytes ENSPTRG00000009345 ortholog_one2one 1 retrogene
retro_ptro_1425,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_1818 93.59 98.62
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Download FASTA sequences of all ENSPPYG00000008888 retrocopies