Parental gene: | HAUS1, ENSPPYG00000009131 |
| Aliases: | None |
| Description: | HAUS augmin-like complex, subunit 1 [Source:HGNC Symbol;Acc:25174] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 18:58590340..58613059(+) |
>ENSPPYG00000009131
ATGGAGCCACAGGAGGAGACAGAAATGCAGGTTGCTGCGTGGTTAAAAAAAATATTTGGAGATCATCCTATTCCGCAGTA
TGAGGTGAACCCACGGACCACAGAGATTTTACATCACCTTTCAGAACGCAATAGGGTCCGGGACAGGGATGTCTACCTGG
TAATAGAGGACTTGAAGCAGAAAGCAAGTGAATATGAGTCAGAAGCCAAGTATCTTCAAGACCTTCTCATGGAGAGTGTG
AATTTTTCCCCCGCCAATCTCTCTAGCACTGGTTCCAGGTATCTGAATGCTTTGGTTGACAGTGCGGTGGCCCTTGAAAC
AAAGGATACCTCGCTAGCTAGTTTTATCCCTGCAGTGAATGATTTGACCTCTGATCTCTTTCGTACCAAATCCAAAAGTG
AAGAAATCAAGATTGAACTGGAAAAACTTGAAAAAAATCTAACTGCAACTTTAGTATTAGAAAAATGTCTACAAGAGGAT
GTCAAGAAAGCAGAATTGCATCTGTCTACAGAAAGGGCCAAAGTTGATAATCGTCGTCAGAACATGGACTTTCTAAAAGC
AAAGTCAGAGGAATTCAGATTTGGAATCAAGGCTGCAGAGGAGCAACTTTCAGCCAGAGGCATGGATGCTTCTCTGTCTC
ATCAGTCCCTAGTAGCACTATCAGAGAAACTGGCAAGATTAAAGCAACAGACTATACCTTTGAAGAAAAAATTGGAGTCC
TATTTAGACTTAATGCCGAATCCATCTCTTGCTCAAGTGAAAATTGAAGAAGCAAAGCGAGAACTAGATAGCATTGAAGC
TGAACTTACAAGAAGAGTAGACATGATGGAACTGTAA
ATGGAGCCACAGGAGGAGACAGAAATGCAGGTTGCTGCGTGGTTAAAAAAAATATTTGGAGATCATCCTATTCCGCAGTA
TGAGGTGAACCCACGGACCACAGAGATTTTACATCACCTTTCAGAACGCAATAGGGTCCGGGACAGGGATGTCTACCTGG
TAATAGAGGACTTGAAGCAGAAAGCAAGTGAATATGAGTCAGAAGCCAAGTATCTTCAAGACCTTCTCATGGAGAGTGTG
AATTTTTCCCCCGCCAATCTCTCTAGCACTGGTTCCAGGTATCTGAATGCTTTGGTTGACAGTGCGGTGGCCCTTGAAAC
AAAGGATACCTCGCTAGCTAGTTTTATCCCTGCAGTGAATGATTTGACCTCTGATCTCTTTCGTACCAAATCCAAAAGTG
AAGAAATCAAGATTGAACTGGAAAAACTTGAAAAAAATCTAACTGCAACTTTAGTATTAGAAAAATGTCTACAAGAGGAT
GTCAAGAAAGCAGAATTGCATCTGTCTACAGAAAGGGCCAAAGTTGATAATCGTCGTCAGAACATGGACTTTCTAAAAGC
AAAGTCAGAGGAATTCAGATTTGGAATCAAGGCTGCAGAGGAGCAACTTTCAGCCAGAGGCATGGATGCTTCTCTGTCTC
ATCAGTCCCTAGTAGCACTATCAGAGAAACTGGCAAGATTAAAGCAACAGACTATACCTTTGAAGAAAAAATTGGAGTCC
TATTTAGACTTAATGCCGAATCCATCTCTTGCTCAAGTGAAAATTGAAGAAGCAAAGCGAGAACTAGATAGCATTGAAGC
TGAACTTACAAGAAGAGTAGACATGATGGAACTGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 2 .21 RPM |
| SRP007412_cerebellum | 3 .04 RPM |
| SRP007412_heart | 1 .87 RPM |
| SRP007412_kidney | 1 .76 RPM |
| SRP007412_liver | 1 .10 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000001139 | ortholog_one2one | 3 retrogenes | |
| Homo sapiens | ENSG00000152240 | ortholog_one2one | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000010098 | ortholog_one2one | 2 retrogenes | |
| Loxodonta africana | ENSLAFG00000010897 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000003124 | ortholog_one2one | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000003208 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000011216 | ortholog_one2one | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000009992 | ortholog_one2one | 3 retrogenes | |
| Tupaia belangeri | ENSTBEG00000010911 | ortholog_one2one | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_2693 | 90.00 | 74.82 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_3344 | 77.48 | 78.78 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_3615 | 85.93 | 93.17 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000009131 retrocopies