Parental gene: | ACTN4, ENSPPYG00000009939 |
| Aliases: | None |
| Description: | alpha-actinin-4 [Source:RefSeq peptide;Acc:NP_001127286] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 19:39570202..39601056(+) |
>ENSPPYG00000009939
ATGCTGCTCCTGGAGGTCATATCAGGGGAGCGGTTACCTAAGCCGGAGCGGGGGAAGATGAGAGTGCACAAAATCAACAA
TGTGAACAAAGCGCTGGACTTTATTGCCAGCAAAGGCGTCAAGCTGGTCTCCATCGGGGCAGAAGAGATTGTGGACGGCA
ATGCAAAGATGACCCTGGGAATGATCTGGACCATCATCCTTAGGTTCGCCATCCAGGACATCTCCGTGGAAGAGACCTCG
GCCAAGGAAGGGCTCCTTCTCTGGTGCCAGAGAAAGACAGCCCCGTATAAGAACGTCAATGTGCAGAACTTCCACATCAG
CTGGAAGGATGGTCTTGCCTTCAATGCCCTGATCCACCGGCACAGACCAGAGCTGATTGAGTATGACAAGCTGAGGAAGG
ACGACCCTGTCACCAACCTGAACAATGCCTTCGAAGTGGCTGAGAAATACCTCGACATCCCCAAGATGCTGGATGCAGAG
GACATCGTGAACACGGCCCGGCCCGACGAGAAGGCCATAATGACCTATGTGTCCAGCTTCTACCATGCCTTTTCAGGAGC
GCAGAAGGCTGAAACTGCCGCCAACCGGATCTGCAAGGTGCTGGCTGTCAACCAAGAGAACGAGCACTTGATGGAGGACT
ACGAGAAGCTGGCCAGCGATCTCCTGGAGTGGATCCGGCGCACCATCCCCTGGCTGGAGGACCGTGTGCCCCAAAAGACT
ATCCAGGAGATGCAGCAGAAGCTGGAGGACTTCCGCGACTACCGGCGCGTGCACAAGCCGCCCAAGGTGCAGGAGAAGTG
CCAGCTGGAGATCAACTTCAACACACTGCAGACCAAGCTGCGCCTCAGCAACCGGCCCGCCTTCATGCCCTCCGAGGGCA
AGATGGTCTCGGACATCAACAACGGCTGGCAGCACTTGGAGCAGGCTGAGAAGGGCTATGAGGAATGGCTGCTGAATGAG
ATCCGCAGGCTGGAGCGGCTCGACCACCTGGCAGAGAAGTTCCGGCAGAAGGCCTCCATCCACGAGGCCTGGACTGACGG
GAAGGAAGCCATGCTGAAGCACCGAGACTACGAGACGGCCACGCTATCGGACATCAAAGCCCTCATTCGCAAGCACGAGG
CCTTCGAGAGTGACCTGGCCGCGCACCAGGACCGCGTGGAGCAGATCGCCGCCATTGCCCAGGAGCTCAACGAACTGGAT
TACTACGACTCCCACAATGTCAACACCCGGTGCCAGAAGATCTGCGACCAGTGGGACGCCCTCGGCTCTCTGACGCACAG
TCGCAGGGAAGCCCTGGAGAAAACAGAGAAGCAGCTGGAGGCCATCGACCAGCTGCACCTGGAGTATGCCAAGCGCGCAG
CCCCATTCAACAACTGGATGGAGAGCGCCATGGAGGACCTCCAGGACATGTTCATTGTCCATACCATCGAGGAGATTGAG
GGCCTGATCTCAGCCCACGACCAGTTCAAGTCCACCCTGCCGGACGCCGACAGGGAGCGCGAGGCCATCCTGGCCATCCA
CAAGGAGGCCCAGAGGATCGCTGAAAGCAACCACATCAAGCTGTCGGGCAGCAACCCCTACACCACTGTCACCCCACAGA
TCATCAACTCCAAGTGGGAGAAGGTACAGCAGCTGGTGCCAAAACGGGACCACGCCCTCCTGGAGGAGCAGAGCAAGCAG
CAGTCCAACGAGCACCTGCGCCGCCAGTTTGCCAGCCAGGCCAACGTCGTGGGGCCCTGGATCCAGACCAAGATGGAGGA
GATCGGGCGCATCTCCATTGAGATGAACGGGACCCTGGAGGACCAGCTGAGCCACCTGAAGCAGTATGAACGCAGCATCG
TGGACTACAAGCCTAACCTGGACCTGCTGGAGCAGCAGCACCAGCTCATCCAGGAGGCCCTCATCTTCGACAACAAGCAC
ACCAACTATACCATGGAGCACATCCGTGTGGGCTGGGAGCAGCTGCTCACCACCATTGCCCGCACCATCAATGAGGTGGA
GAACCAGATCCTCACCCGCGACGCCAAGGGCATCAGCCAGGAGCAGATGCAGGAGTTCCGGGCGTCCTTCAACCACTTCG
ACAAGGATCATGGCGGGGCGCTGGGGCCCGAGGAGTTCAAGGCCTGCCTCATCAGCCTGGGCTACGACGTGGAGAACGAC
CGGCAGGGTGAGGCCGAGTTCAACCGCATCATGAGCCTGGTCGACCCCAACCATAGTGGCCTTGTGACCTTCCAAGCCTT
CATCGACTTCATGTCGCGGGAGACCACCGACACGGACACGGCCGACCAGGTCATCGCTTCCTTCAAGGTCCTGGCAGGGG
ACAAGAACTTCATCACAGCTGAGGAGCTGCGGAGAGAGCTGCCCCCCGACCAGGCTGAGTACTGCATCGCCCGCATGGCG
CCGTACCAGGGCCCTGATGCCGTGCCCGGCGCCCTTGACTACAAGTCCTTCTCCACAGCCCTGTATGGCGAGAGCGACCT
GTGA
ATGCTGCTCCTGGAGGTCATATCAGGGGAGCGGTTACCTAAGCCGGAGCGGGGGAAGATGAGAGTGCACAAAATCAACAA
TGTGAACAAAGCGCTGGACTTTATTGCCAGCAAAGGCGTCAAGCTGGTCTCCATCGGGGCAGAAGAGATTGTGGACGGCA
ATGCAAAGATGACCCTGGGAATGATCTGGACCATCATCCTTAGGTTCGCCATCCAGGACATCTCCGTGGAAGAGACCTCG
GCCAAGGAAGGGCTCCTTCTCTGGTGCCAGAGAAAGACAGCCCCGTATAAGAACGTCAATGTGCAGAACTTCCACATCAG
CTGGAAGGATGGTCTTGCCTTCAATGCCCTGATCCACCGGCACAGACCAGAGCTGATTGAGTATGACAAGCTGAGGAAGG
ACGACCCTGTCACCAACCTGAACAATGCCTTCGAAGTGGCTGAGAAATACCTCGACATCCCCAAGATGCTGGATGCAGAG
GACATCGTGAACACGGCCCGGCCCGACGAGAAGGCCATAATGACCTATGTGTCCAGCTTCTACCATGCCTTTTCAGGAGC
GCAGAAGGCTGAAACTGCCGCCAACCGGATCTGCAAGGTGCTGGCTGTCAACCAAGAGAACGAGCACTTGATGGAGGACT
ACGAGAAGCTGGCCAGCGATCTCCTGGAGTGGATCCGGCGCACCATCCCCTGGCTGGAGGACCGTGTGCCCCAAAAGACT
ATCCAGGAGATGCAGCAGAAGCTGGAGGACTTCCGCGACTACCGGCGCGTGCACAAGCCGCCCAAGGTGCAGGAGAAGTG
CCAGCTGGAGATCAACTTCAACACACTGCAGACCAAGCTGCGCCTCAGCAACCGGCCCGCCTTCATGCCCTCCGAGGGCA
AGATGGTCTCGGACATCAACAACGGCTGGCAGCACTTGGAGCAGGCTGAGAAGGGCTATGAGGAATGGCTGCTGAATGAG
ATCCGCAGGCTGGAGCGGCTCGACCACCTGGCAGAGAAGTTCCGGCAGAAGGCCTCCATCCACGAGGCCTGGACTGACGG
GAAGGAAGCCATGCTGAAGCACCGAGACTACGAGACGGCCACGCTATCGGACATCAAAGCCCTCATTCGCAAGCACGAGG
CCTTCGAGAGTGACCTGGCCGCGCACCAGGACCGCGTGGAGCAGATCGCCGCCATTGCCCAGGAGCTCAACGAACTGGAT
TACTACGACTCCCACAATGTCAACACCCGGTGCCAGAAGATCTGCGACCAGTGGGACGCCCTCGGCTCTCTGACGCACAG
TCGCAGGGAAGCCCTGGAGAAAACAGAGAAGCAGCTGGAGGCCATCGACCAGCTGCACCTGGAGTATGCCAAGCGCGCAG
CCCCATTCAACAACTGGATGGAGAGCGCCATGGAGGACCTCCAGGACATGTTCATTGTCCATACCATCGAGGAGATTGAG
GGCCTGATCTCAGCCCACGACCAGTTCAAGTCCACCCTGCCGGACGCCGACAGGGAGCGCGAGGCCATCCTGGCCATCCA
CAAGGAGGCCCAGAGGATCGCTGAAAGCAACCACATCAAGCTGTCGGGCAGCAACCCCTACACCACTGTCACCCCACAGA
TCATCAACTCCAAGTGGGAGAAGGTACAGCAGCTGGTGCCAAAACGGGACCACGCCCTCCTGGAGGAGCAGAGCAAGCAG
CAGTCCAACGAGCACCTGCGCCGCCAGTTTGCCAGCCAGGCCAACGTCGTGGGGCCCTGGATCCAGACCAAGATGGAGGA
GATCGGGCGCATCTCCATTGAGATGAACGGGACCCTGGAGGACCAGCTGAGCCACCTGAAGCAGTATGAACGCAGCATCG
TGGACTACAAGCCTAACCTGGACCTGCTGGAGCAGCAGCACCAGCTCATCCAGGAGGCCCTCATCTTCGACAACAAGCAC
ACCAACTATACCATGGAGCACATCCGTGTGGGCTGGGAGCAGCTGCTCACCACCATTGCCCGCACCATCAATGAGGTGGA
GAACCAGATCCTCACCCGCGACGCCAAGGGCATCAGCCAGGAGCAGATGCAGGAGTTCCGGGCGTCCTTCAACCACTTCG
ACAAGGATCATGGCGGGGCGCTGGGGCCCGAGGAGTTCAAGGCCTGCCTCATCAGCCTGGGCTACGACGTGGAGAACGAC
CGGCAGGGTGAGGCCGAGTTCAACCGCATCATGAGCCTGGTCGACCCCAACCATAGTGGCCTTGTGACCTTCCAAGCCTT
CATCGACTTCATGTCGCGGGAGACCACCGACACGGACACGGCCGACCAGGTCATCGCTTCCTTCAAGGTCCTGGCAGGGG
ACAAGAACTTCATCACAGCTGAGGAGCTGCGGAGAGAGCTGCCCCCCGACCAGGCTGAGTACTGCATCGCCCGCATGGCG
CCGTACCAGGGCCCTGATGCCGTGCCCGGCGCCCTTGACTACAAGTCCTTCTCCACAGCCCTGTATGGCGAGAGCGACCT
GTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 117 .60 RPM |
| SRP007412_cerebellum | 65 .42 RPM |
| SRP007412_heart | 56 .02 RPM |
| SRP007412_kidney | 237 .70 RPM |
| SRP007412_liver | 93 .86 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000130402 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_2603 | 89.16 | 58.65 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000009939 retrocopies