Parental gene: | HNRNPL, ENSPPYG00000009945 |
| Aliases: | None |
| Description: | heterogeneous nuclear ribonucleoprotein L [Source:HGNC Symbol;Acc:5045] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 19:39733440..39748285(-) |
>ENSPPYG00000009945
ATGTCGCGGAGGCTGCTGCCCCGGGCGGAGAAGCGGCGTCGGCGGCTGGAGCAGAGGCAGCAGCCGGACGAGCAGCGGAG
GCGGTCGGGAGCGATGGTGAAGATGGCGGCGGCGGGCGGCGGAGGCGGCGGTGGCCGCTACTACGGCGGCGGCAGTGAGG
GCGGCCGGGCCCCTAAGCGGCTCAAGACAGACAACGCCGGCGACCAGCACGGAGGCGGCGGCGGTGGCGGTGGAGGAGCC
GGGGCGGCGGGCGGCGGCGGCGGCGGGGAGAACTACGATGACCCGCACAAAACCCCTGCCTCCCCAGTTGTCCACATCAG
GGGCCTGATTGACGGTGTGGTGGAAGCTGACCTTGTGGAGGCCTTGCAGGAGTTTGGACCCATCAGCTATGTGGTGGTAA
TGCCTAAAAAGAGACAAGCACTGGTGGAGTTTGAAGATGTGTTGGGGGCTTGCAACGCAGTGAACTACGCAGCCGACAAC
CAAATATACATTGCTGGTCACCCAGCTTTTGTCAACTACTCTACCAGCCAGAAGATCTCCCGCCCTGGGGACTCGGATGA
CTCCCGGAGCGTGAACAGTGTGCTTCTCTTTACCATCCTGAACCCCATTTATTCGATCACCACGGATGTTCTTTACACTA
TCTGTAATCCTTGTGGCCCTGTCCAGAGAATTGTCATTTTCAGGAAGAATGGAGTTCAGGCGATGGTGGAATTTGACTCT
GTTCAAAGTGCCCAGCGGGCCAAGGCCTCTCTCAATGGGGCTGATATCTATTCTGGCTGTTGCACTCTGAAGATCGAATA
CGCAAAGCCTACACGCTTGAATGTGTTCAAGAATGATCAGGATACTTGGGACTACACAAACCCCAATCTCAGTGGACAAG
GTGACCCTGGCAGCAACCCCAACAAACGCCAGAGGCAGCCCCCTCTCCTGGGAGATCACCCCGCAGAATATGGAGGGCCC
CACGGTGGGTACCACAGCCATTATCATGATGAGGGCTACGGGCCCCCCCCACCTCACTACGAAGGGAGAAGGATGGGTCC
ACCAGTGGGGGGTCACCGTCGGGGCCCAAGTCGCTACGGCCCCCAGTATGGGCACCCCCCACCCCCTCCCCCACCACCCG
AGTTTTTTCCTCACGCCGACAGCCCTGTGCTCATGGTCTATGGCTTGGATCAATCTAAGATGAACTGTGACCGAGTCTTC
AATGTCTTCTGCTATGGCAATGTGGAGAAGGTGAAATTCATGAAAAGCAAGCCGGGGGCCGCCATGGTGGAGATGGCTGA
TGGCTACGCTGTGGACCGGGCCATTACTCACCTCAACAACAACTTCATGTTTGGGCAGAAGCTGAATGTCTGTGTCTCCA
AGCAGCCAGCCATCATGCCCGGTCAGTCATACGGGTTGGAAGACGGGTCTTGCAGTTACAAAGACTTCAGTGAATCCCGG
AACAATCGCTTCTCCACCCCAGAGCAGGCAGCCAAGAACCGCATCCAGCACCCCAGCAACGTGCTGCACTTCTTCAACGC
CCCGCTGGAGGTGACCGAGGAGAACTTCTTTGAGATCTGCGATGAGCTGGGAGTGAAGCGGCCATCTTCTGTGAAAGTAT
TCTCAGGCAAAAGTGAGCGCAGCTCCTCTGGACTGCTGGAGTGGGAATCCAAGAGCGATGCCCTGGAGACTCTGGGCTTC
CTGAACCATTACCAGATGAAAAACCCAAATGGTCCATACCCTTACACTCTGAAGTTGTGTTTCTCCACCGCTCAGCACGC
CTCCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 133 .75 RPM |
| SRP007412_cerebellum | 100 .32 RPM |
| SRP007412_heart | 41 .93 RPM |
| SRP007412_kidney | 104 .64 RPM |
| SRP007412_liver | 72 .28 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Echinops telfairi | ENSETEG00000003779 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000014696 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000009289 | within_species_paralog | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000010941 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000016563 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_1282 | 90.66 | 84.86 | Please wait, loading  |
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| 2. | retro_pabe_3576 | 90.87 | 84.86 | Please wait, loading |
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Download FASTA sequences of all ENSPPYG00000009945 retrocopies