Parental gene: | GLTSCR2, ENSPPYG00000010181 |
| Aliases: | None |
| Description: | glioma tumor suppressor candidate region gene 2 [Source:HGNC Symbol;Acc:4333] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 19:49192690..49204831(+) |
>ENSPPYG00000010181
ATGGCGGCAGGAGACAGTGGCGTTGGTGGGAAGCACAGCTCGAAAAGCGATGCTGATTCTGGTTTCCTGGGGCTGCGGCC
CACTTCGGTGGACCCAGCGCTGAGGCGGCGGCGGCGAGGCCCAAGAAATAAGAAGCGGGGCTGGCGGCGGCTTGCTCAGG
AGCCGCTGGGGCTGGAGGTTGACCAGTTCCTGGAAGACGTGCGGCTACAGGAACGCACGAGCGGTGGCTTGCTGTCAGAG
GCCCCAAATGAAAAACTCTTCTTCGTGGACACTGGCTCCAAGGAAAAAGGGCTGACAAAGAAGAGAACCAAAGTCCAAAA
GAAGTCACTGCTTCTCAAGAAACCCCTTCGGGTTGACCTCATCCTCGAGAACACATCCAAAGTCCCTGCTCCCAAAGACG
TCCTCGCCCACCAGGTCCCCAACGCCAAGAAGCTCAGGCGGAAGGAGCAGCTATGGGAGAAGCTGGCCAAGCAGGGCGAG
CTGCCCCGGGAGGTGCGCAGGGCCCAGGCCCGGCTCCTCAACCCTCCAGCGGCCAGGGCCAAGCCCGGGCCCCAGGACAC
CGTGGAACGGCCCTTCTACGACCTCTGGGCCTCAGACAACCCCCTGGACAGGCCGTTGGTTGGCCAGGATGAGTTTTTCC
TGGAGCAGACCAAGAAGAAAGGAGTGAAGCGGCCACAACGCCTGCACACCAAGCCGTCCCAGGCACCCGCCGTGGAGGTG
GCGCCTGCTGGAGCTTCCTACAACCCATCCTTTGAAGACCACCAGACCCTGCTCTCAGCGGCCCACGAGGTGGAGTTGCA
GCGGCAGAAGGAGGCGGAGAAGCTGGAGCGGCAGCTGGCCCTGCCTGCAACAGAGCAGGCCGCCACCCAGGAGTCCACGT
TCCAGGAGCTGTGCGAGGGGCTGCTGGAGGAGTCGGATGGTGAGGGGGAGCCAGGCCAGGGCGAGGGGCCGGAGGCTGGG
GATGCCGAGGTCGGTCCCATGCCCGCCCGCCTGGCCACCACAGAGAAGAAGACGGAGCAGCAGCGGCGGCGGGAGAAGGT
TGCGCGCAGGCTGCGGGTACAGCAGGCCGCGTTGCTGGCCGCCCGGCTCCGGCACCAGGAGCTGTTCCGGCTGCTCGGGA
TCAAGGACCAGTACCAGGCACCTGACATTGACGTGCAGCTGAGCTCGGAGCTGACGGACTCGCTCAGGACCCTGAAGCCC
GAGGGCAACATCCTTCGAGACCGGTTCAAGAGCTTCCAGAGGAGGAATATGATCGAGCCTCGAGAGAGAGCCAAGTTCAA
ACGCAAGTACAAGGTGAAGCTGGTGGAGAAGCGGGCGTTCCGCGAGATCCAGTTGTAG
ATGGCGGCAGGAGACAGTGGCGTTGGTGGGAAGCACAGCTCGAAAAGCGATGCTGATTCTGGTTTCCTGGGGCTGCGGCC
CACTTCGGTGGACCCAGCGCTGAGGCGGCGGCGGCGAGGCCCAAGAAATAAGAAGCGGGGCTGGCGGCGGCTTGCTCAGG
AGCCGCTGGGGCTGGAGGTTGACCAGTTCCTGGAAGACGTGCGGCTACAGGAACGCACGAGCGGTGGCTTGCTGTCAGAG
GCCCCAAATGAAAAACTCTTCTTCGTGGACACTGGCTCCAAGGAAAAAGGGCTGACAAAGAAGAGAACCAAAGTCCAAAA
GAAGTCACTGCTTCTCAAGAAACCCCTTCGGGTTGACCTCATCCTCGAGAACACATCCAAAGTCCCTGCTCCCAAAGACG
TCCTCGCCCACCAGGTCCCCAACGCCAAGAAGCTCAGGCGGAAGGAGCAGCTATGGGAGAAGCTGGCCAAGCAGGGCGAG
CTGCCCCGGGAGGTGCGCAGGGCCCAGGCCCGGCTCCTCAACCCTCCAGCGGCCAGGGCCAAGCCCGGGCCCCAGGACAC
CGTGGAACGGCCCTTCTACGACCTCTGGGCCTCAGACAACCCCCTGGACAGGCCGTTGGTTGGCCAGGATGAGTTTTTCC
TGGAGCAGACCAAGAAGAAAGGAGTGAAGCGGCCACAACGCCTGCACACCAAGCCGTCCCAGGCACCCGCCGTGGAGGTG
GCGCCTGCTGGAGCTTCCTACAACCCATCCTTTGAAGACCACCAGACCCTGCTCTCAGCGGCCCACGAGGTGGAGTTGCA
GCGGCAGAAGGAGGCGGAGAAGCTGGAGCGGCAGCTGGCCCTGCCTGCAACAGAGCAGGCCGCCACCCAGGAGTCCACGT
TCCAGGAGCTGTGCGAGGGGCTGCTGGAGGAGTCGGATGGTGAGGGGGAGCCAGGCCAGGGCGAGGGGCCGGAGGCTGGG
GATGCCGAGGTCGGTCCCATGCCCGCCCGCCTGGCCACCACAGAGAAGAAGACGGAGCAGCAGCGGCGGCGGGAGAAGGT
TGCGCGCAGGCTGCGGGTACAGCAGGCCGCGTTGCTGGCCGCCCGGCTCCGGCACCAGGAGCTGTTCCGGCTGCTCGGGA
TCAAGGACCAGTACCAGGCACCTGACATTGACGTGCAGCTGAGCTCGGAGCTGACGGACTCGCTCAGGACCCTGAAGCCC
GAGGGCAACATCCTTCGAGACCGGTTCAAGAGCTTCCAGAGGAGGAATATGATCGAGCCTCGAGAGAGAGCCAAGTTCAA
ACGCAAGTACAAGGTGAAGCTGGTGGAGAAGCGGGCGTTCCGCGAGATCCAGTTGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 16 .64 RPM |
| SRP007412_cerebellum | 12 .77 RPM |
| SRP007412_heart | 15 .20 RPM |
| SRP007412_kidney | 31 .85 RPM |
| SRP007412_liver | 21 .94 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000105373 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000002525 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000003143 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000011215 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000013023 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_653 | 94.32 | 51.24 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_662 | 96.32 | 79.33 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_1270 | 88.59 | 84.27 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000010181 retrocopies