Parental gene:

CXADR, ENSPPYG00000011295

Aliases:None
Description:coxsackievirus and adenovirus receptor homolog precursor [Source:RefSeq peptide;Acc:NP_001127547]
Organism:Orangutan (Pongo abelii)
Coordinates:21:17259066..17316848(+)


>ENSPPYG00000011295
ATGGCGCTCCTGCTGCGCTTCGTGCTCCTGTGCGGAGTCGCGGATTTTGCCAGAAGTTTGAGTATCACTACTCCTGAAGA
GATGATTGAAAAAGCCAAAGGGGAAACTGCCTATCTGCCATGCAAATTTACGCTTAGTCCCGAAGACCAGGGACCGCTGG
ACATCGAGTGGCTGATATCACCAGCGGATAATCAGAAGGTGGATCAAGTGATTATTTTATATTCTGGAGACAAAATTTAT
GATGACTACTATCCAGATCTGAAAGGCCGAGTACATTTTACGAGTAATGATCTCAAATCTGGTGATGCATCAATAAATGT
AACGAATTTACAGCTGTCAGATATTGGCACATATCAGTGCAAAGTGAAAAAAGCTCCTGGTGTTGCAAATAAGAAGATTC
ATCTGGTAGTTCTTGTTAAGCCTTCAGGTGCAAGATGTTACGTTGATGGATCAGAAGAAATTGGAAGTGACTTTAAACTA
AAATGTGAACCAAAAGAAGGTTCACTTCCATTACAGTATGAGTGGCAAAAATTGTCTGACTCACAGAAAATGCCCACTTT
GTGGTTAGCAGAAATGACTTCATCTGTTATATCTGTAAAAAATGCCTCTTCAGAGTACTCTGGGACATACAGCTGTACAG
TCAGAAACAGAGTGGGCTCTGATCAGTGCCTGTTGCGTCTAAACGTTGTCCCTCCTTCAAATAAAGCTGGACTAATTGCA
GGAGCCATTATAGGAACTTTGCTTGCTCTGGCGCTCATTGGTCTTATCATCTTTTGCTGTCGTAAAAAGCGCAGAGAAGA
AAAATACGAAAAGGAAGTTCATCACGATATCAGGGAAGATGTGCCACCTCCAAAGAGCCGTACGTCCACTGCCAGAAGCT
ACATCGGCAGTAATCATTCATCCCTGGGATCCATGTCTCCTTCCAACATGGAAGGATATTCCAAGACTCAGTATAACCAA
GTACCAAGTGAAGACTTTGAACGCACTCCTCAGAGTCCGACTCTCCCACCTGCTAAGGTAGCTGCCCCTAATCTAAGTCG
AATGGGCGCGATTCCTGTGATGATTCCAGCACAGAGCAAGGATGGGTCTATAGTATAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 5 .31 RPM
SRP007412_cerebellum 4 .01 RPM
SRP007412_heart 17 .16 RPM
SRP007412_kidney 6 .86 RPM
SRP007412_liver 11 .78 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000012975 ortholog_one2one 1 retrogene
retro_dnov_990,
Homo sapiens ENSG00000154639 ortholog_one2one 6 retrogenes
retro_hsap_1533, retro_hsap_1535, retro_hsap_1918, retro_hsap_2492, retro_hsap_4322, retro_hsap_4323,
Nomascus leucogenys ENSNLEG00000002063 ortholog_one2one 2 retrogenes
retro_nleu_138, retro_nleu_58,
Pan troglodytes ENSPTRG00000013795 ortholog_one2one 4 retrogenes
retro_ptro_1244, retro_ptro_1444, retro_ptro_801, retro_ptro_995,
Sarcophilus harrisii ENSSHAG00000005309 ortholog_one2one 1 retrogene
retro_shar_252,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_1273 93.42 100.00
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2. retro_pabe_2776 96.73 100.00
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Download FASTA sequences of all ENSPPYG00000011295 retrocopies