Parental gene:

MRPS5, ENSPPYG00000012051

Aliases:None
Description:28S ribosomal protein S5, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q5REJ1]
Organism:Orangutan (Pongo abelii)
Coordinates:2a:3328732..3367243(-)


>ENSPPYG00000012051
ATGGCGACCGCGGTGCGCGCTGTGGGCTGCCTCCCCGTGCTGTGTAGCGGGACGGCAGGTCATTTATTGAGGAGGCAGCA
TTCCCTAAACACCTTACCAGCAGCTTCCATTTTGGCATGGAAGAGTGTTCTCAGCAATGGTCATTTGTCATCACTGGGAA
CCAGAGATACCCATCCCTACGCCAGCTTGAGCCGTGCACTGCAGACACAATGCTGTATTTCTTCTCCCAGTCACCTGATG
AGCCAGCAGTATAGACCATATAGTTTCTTCACTAAATTGACTGCAGATGAGCTGTGGAAAGGCGCTTTAGCAGAGACTGG
TGCTGGAGCAAAAAAAGGAAGAGGCAAAAGAACTAAAAAGAAGAAAAGAAAGGATCTGAACAGGGGTCAGATCATTGGTG
AAGGGCGTTATGGTTTTCTATGGCCTGGGCTGAATGTCCCTGTTATGAAAAATGGAACAGTGCAGACCATTGCCCAAAGA
AGCAAGGAAGAGCAGGAGAAGGTGGAGGCAGACGTTATCCAGCAGAGAGAAGAGTGGGAACGAAAGAAGAAGATGAAGGT
TAAACGGGAACGAGGATGGAGTGGAAACTCATGGGGAGGCCTCAGTCTTGGCCCCCCTGACCCTGGTCCCAGTGGAGAAA
CATATGAGGATTTTGATACCAGGATACTTGAGGTAAGAAATGTTTTCACTATGACTGCGAAAGAGGGAAGAAGGAAATCG
ATCCGTGTCCTGGTGGCTGTGGGGAACGGAAAAGGAGCTGCAGGTTTTGCTATTGGGAAAGCCACTGATCGGATGGATGC
TTTCAGGAAAGCAAAGAACAGAGCAGTTCACCATTTGTATTATATAGAACGATATGAAGACCATACAATATTCCATGATA
TTTCATTAAGATTTAAAAGGACGCATATCAAGATGAAGAAACAACCCAAAGGTTACGGCCTCCGCTGCCACAGGGCCATC
ATCACCATCTGCCGGCTCATTGGCATCAAAGACATGTATGCCAAGGTCTCTGGGTCCACTAATATGCTCAGCCTCACCCA
GGGCCTCTTCCATGGGCTCTCCAGACAGGAAACCCATCAACAGCTGGCTGATAAGAAGGGCCTCCATGTTGTGGAAATCC
GAGAGGAATGTGGCCCTCTGCCCATTGTGGTTGCCTCCCCCCGGGGGGCCTTGAGGAAGGATCCAGAGCCAGATGAGGTT
CCAGACATCAAACTGGACTGGGAAGACGTGAAGACTGCACAGGGAATGAAGCGCTGTGTGTGGTCTAATTTAAAGAGAGC
CGCCACGTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 24 .77 RPM
SRP007412_cerebellum 32 .83 RPM
SRP007412_heart 36 .85 RPM
SRP007412_kidney 41 .14 RPM
SRP007412_liver 43 .76 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000018942 ortholog_one2one 1 retrogene
retro_cjac_2129,
Homo sapiens ENSG00000144029 ortholog_one2one 1 retrogene
retro_hsap_3116,
Gorilla gorilla ENSGGOG00000001750 ortholog_one2one 1 retrogene
retro_ggor_2139,
Microcebus murinus ENSMICG00000007318 ortholog_one2one 1 retrogene
retro_mmur_565,
Macaca mulatta ENSMMUG00000016239 ortholog_one2one 2 retrogenes
retro_mmul_2110, retro_mmul_2251,
Mus musculus ENSMUSG00000027374 ortholog_one2one 1 retrogene
retro_mmus_2014,
Nomascus leucogenys ENSNLEG00000000002 ortholog_one2one 1 retrogene
retro_nleu_1438,
Pan troglodytes ENSPTRG00000012209 ortholog_one2one 1 retrogene
retro_ptro_2107,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_2574 71.97 60.84
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Download FASTA sequences of all ENSPPYG00000012051 retrocopies