Parental gene: | BAP1, ENSPPYG00000013809 |
| Aliases: | None |
| Description: | BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase) [Source:HGNC Symbol;Acc:950] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 3:93933349..93942659(+) |
>ENSPPYG00000013809
ATGAATAAGGGCTGGCTGGAGCTGGAGAGCGACCCAGGCCTCTTCACCCTGCTCGTGGAAGATTTCGGTGTCAAAGGGGT
GCAAGTGGAGGAGATCTACGACCTTCAGAGCAAATGTCAGGGCCCTGTATATGGATTTATCTTCCTGTTCAAATGGATCG
AAGAGCGCCGGTCCCGGCGAAAGGTCTCTACCTTGGTGGATGATACGTCCGTGATTGATGATGATATTGTGAATAACATG
TTCTTTGCCCACCAGCTGATACCCAACTCTTGTGCCACTCATGCCTTGCTGAGCGTGCTCCTGAACTGCAGCAACGTGGA
CCTGGGACCCACCCTGAGTCGCATGAAGGACTTCACCAAGGGCTTCAGCCCTGAGAGCAAAGGATATGCGATTGGCAATG
CCCCGGAGTTGGCCAAGGCACATAATAGCCATGCCAGGCCCGAGCCACGCCACCTCCCTGAGAAGCAGAATGGCCTTAGT
GCAGTGCGGACCATGGAGGCGTTCCACTTTGTCAGCTATGTGCCTATCACAGGCCGGCTCTTTGAGCTGGATGGGCTGAA
GGTCTACCCCATTGACCATGGGCCCTGGGGGGAGGACGAGGAGTGGACAGACAAGGCCCGGCGGGTCATCATGGAGCGTA
TTGGCCTCGCCACTGCAGGGGAGCCCTACCACGACATCCGCTTCAACCTGATGGCAGTGGTGCCCGACCGCAGGATCAAG
TATGAGGCCAGGCTGCACGTGCTGAAGGTGAACCGTCAGACAGTACTAGAGGCTCTGCAGCAGCTCATAAGAGTAACACA
GCCAGAGCTGATTCAGACCCACAAGTCTCAAGAGTCACAGCTGCCTGAGGAGTCCAAGTCAGCCAGCAACAAGTCCCCAC
TGGTGCTGGAAGCAAACAGGGCCCCTGCAGCCTCTGAGGGCACCCACACAGATGGTGCAGAGGAGGCGGCTGGTTCATGC
GCACAAGCCCCATCCCACAGCCCTCCCAACAAACCCAAGCTGGTGGTGAAGCCTCCAGGCAGCAGCCTCAATGGGGTTCC
CCCCAACCCCACTCCCATTGTCCAGCGGCTGCCGGCCTTTCTAGACAATCACAATTATGCCAAGTCCCCCATGCAGGAGG
AAGAAGACCTGGCGGCAGGTGTGGGCCGCAGCCGAGTTCCAGTCCGCCCACCCCAGCAGTACTCAGATGACGAGGATGAC
TATGAGGATGATGAGGAGGATGACGTGCAGAACACCAACTCTGCCCTTAGGTATAAGGGGAAGGGAACAGGGAAGCCAGG
GGCATTGAGCGGTTCTGCTGATGGGCAACTGTCAGTGCTGCAGCCCAACACCATCAACGTCTTGGCTGAGAAGCTCAAAG
AGTCCCAGAAGGACCTCTCAATTCCTCTGTCCATCAAGACTAGCAGTGGGGCTGGGAGTCCAGCTGTGGCAGTGCCCACA
CACTCGCAGCCCTCACCCACCCCCAGCAATGAGAGTACGGACACGGCCTCTGAGATCGGCAGTGCTTTCAACTCGCCACT
GCGCTCGCCTATCCGCTCGGCCAACCCAACGCGGCCCTCCAGCCCTGTCACCTCCCACATCTCCAAGGTGCTTTTTGGAG
AGGATGACAGCCTGCTGCGTGTTGACTGCATACGCTACAACCGTGCTGTCCGTGATCTGGGTCCTGTCATCAGCACAGGC
CTGCTGCACCTGGCTGAGGATGGGGTGCTGAGTCCCCTGGCACTGACAGAGGGTGGGAAGGGTTCCTCGCCCTCCGTCAG
ACCAATCCAAGGCAGCCAGGGGTCCAGCAGCCCAGTGGAGAAGGAGGTCGTGGAAGCCACGGACAGCAGAGAGAAGACGG
GGATGGTGAGGCCTGGCGAGCCCTTGAGTGGGGAGAAATACTCACCCAAGGAGCTGCTGGCACTGCTAAAGTGTGTGGAG
GCTGAGATTGCAAACTATGAGGCGTGCCTCAAGGAAGAGATAGAGAAGAGGAAGAAGTTCAAGATTGATGACCAGAGAAG
GACCCACAACTATGATGAGTTCATCTGCACCTTTATCTCCATGCTGGCTCAGGAAGGCATGCTGGCCAACCTAGTGGAGC
AGAACATCTCTGTGCGGCGGCGCCAAGGGGTCAGCATCGGCCGGCTCCACAAGCAGCGGAAGCCTGACCGGCGGAAACGC
TCTCGCCCCTACAAGGCCAAGCGCCAGTGA
ATGAATAAGGGCTGGCTGGAGCTGGAGAGCGACCCAGGCCTCTTCACCCTGCTCGTGGAAGATTTCGGTGTCAAAGGGGT
GCAAGTGGAGGAGATCTACGACCTTCAGAGCAAATGTCAGGGCCCTGTATATGGATTTATCTTCCTGTTCAAATGGATCG
AAGAGCGCCGGTCCCGGCGAAAGGTCTCTACCTTGGTGGATGATACGTCCGTGATTGATGATGATATTGTGAATAACATG
TTCTTTGCCCACCAGCTGATACCCAACTCTTGTGCCACTCATGCCTTGCTGAGCGTGCTCCTGAACTGCAGCAACGTGGA
CCTGGGACCCACCCTGAGTCGCATGAAGGACTTCACCAAGGGCTTCAGCCCTGAGAGCAAAGGATATGCGATTGGCAATG
CCCCGGAGTTGGCCAAGGCACATAATAGCCATGCCAGGCCCGAGCCACGCCACCTCCCTGAGAAGCAGAATGGCCTTAGT
GCAGTGCGGACCATGGAGGCGTTCCACTTTGTCAGCTATGTGCCTATCACAGGCCGGCTCTTTGAGCTGGATGGGCTGAA
GGTCTACCCCATTGACCATGGGCCCTGGGGGGAGGACGAGGAGTGGACAGACAAGGCCCGGCGGGTCATCATGGAGCGTA
TTGGCCTCGCCACTGCAGGGGAGCCCTACCACGACATCCGCTTCAACCTGATGGCAGTGGTGCCCGACCGCAGGATCAAG
TATGAGGCCAGGCTGCACGTGCTGAAGGTGAACCGTCAGACAGTACTAGAGGCTCTGCAGCAGCTCATAAGAGTAACACA
GCCAGAGCTGATTCAGACCCACAAGTCTCAAGAGTCACAGCTGCCTGAGGAGTCCAAGTCAGCCAGCAACAAGTCCCCAC
TGGTGCTGGAAGCAAACAGGGCCCCTGCAGCCTCTGAGGGCACCCACACAGATGGTGCAGAGGAGGCGGCTGGTTCATGC
GCACAAGCCCCATCCCACAGCCCTCCCAACAAACCCAAGCTGGTGGTGAAGCCTCCAGGCAGCAGCCTCAATGGGGTTCC
CCCCAACCCCACTCCCATTGTCCAGCGGCTGCCGGCCTTTCTAGACAATCACAATTATGCCAAGTCCCCCATGCAGGAGG
AAGAAGACCTGGCGGCAGGTGTGGGCCGCAGCCGAGTTCCAGTCCGCCCACCCCAGCAGTACTCAGATGACGAGGATGAC
TATGAGGATGATGAGGAGGATGACGTGCAGAACACCAACTCTGCCCTTAGGTATAAGGGGAAGGGAACAGGGAAGCCAGG
GGCATTGAGCGGTTCTGCTGATGGGCAACTGTCAGTGCTGCAGCCCAACACCATCAACGTCTTGGCTGAGAAGCTCAAAG
AGTCCCAGAAGGACCTCTCAATTCCTCTGTCCATCAAGACTAGCAGTGGGGCTGGGAGTCCAGCTGTGGCAGTGCCCACA
CACTCGCAGCCCTCACCCACCCCCAGCAATGAGAGTACGGACACGGCCTCTGAGATCGGCAGTGCTTTCAACTCGCCACT
GCGCTCGCCTATCCGCTCGGCCAACCCAACGCGGCCCTCCAGCCCTGTCACCTCCCACATCTCCAAGGTGCTTTTTGGAG
AGGATGACAGCCTGCTGCGTGTTGACTGCATACGCTACAACCGTGCTGTCCGTGATCTGGGTCCTGTCATCAGCACAGGC
CTGCTGCACCTGGCTGAGGATGGGGTGCTGAGTCCCCTGGCACTGACAGAGGGTGGGAAGGGTTCCTCGCCCTCCGTCAG
ACCAATCCAAGGCAGCCAGGGGTCCAGCAGCCCAGTGGAGAAGGAGGTCGTGGAAGCCACGGACAGCAGAGAGAAGACGG
GGATGGTGAGGCCTGGCGAGCCCTTGAGTGGGGAGAAATACTCACCCAAGGAGCTGCTGGCACTGCTAAAGTGTGTGGAG
GCTGAGATTGCAAACTATGAGGCGTGCCTCAAGGAAGAGATAGAGAAGAGGAAGAAGTTCAAGATTGATGACCAGAGAAG
GACCCACAACTATGATGAGTTCATCTGCACCTTTATCTCCATGCTGGCTCAGGAAGGCATGCTGGCCAACCTAGTGGAGC
AGAACATCTCTGTGCGGCGGCGCCAAGGGGTCAGCATCGGCCGGCTCCACAAGCAGCGGAAGCCTGACCGGCGGAAACGC
TCTCGCCCCTACAAGGCCAAGCGCCAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 212 .76 RPM |
| SRP007412_cerebellum | 71 .02 RPM |
| SRP007412_heart | 25 .89 RPM |
| SRP007412_kidney | 73 .85 RPM |
| SRP007412_liver | 30 .08 RPM |
No homologs available
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_697 | 93.38 | 84.36 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000013809 retrocopies