Parental gene: | TRIP13, ENSPPYG00000015309 |
| Aliases: | None |
| Description: | thyroid hormone receptor interactor 13 [Source:HGNC Symbol;Acc:12307] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 5:856419..877459(+) |
>ENSPPYG00000015309
GTGCATCATCGCGGCAGCAGCACTGCAAAGAAAGAAGACATAACCCTGAGTGTTAGAAAGCTACTCAACAGACATAATAT
TGTGTTTGGGGATTACACATGGACTGAGTTTGATGAACCTTTTTTGACCAGAAATGTGCAGTCTGTGTCTATTGTTGACA
CAGAATTAAAGGTTAAAGACTCACAGCCCATCGATTTGAGTGCATGCACTGTTGCACTTCACATCTTCCAGCTGAATGAA
GATGGCCCCAGCAGTGAAAATCTGGAGGAAGAGACAGAAAACATAATTGCAGCAAATCACTGGGTTCTACCTGCAGCTGA
ATTCCATGGGCTTTGGGACAGCTTGGTGTATGATGTGGAAGTCAAATCCCACCTCCTCGATTATGTGATGACAACTTTAC
TGTTTTCAGACAAGAACGTCAACAGCAACCTCATCACCTGGAACCGGGTGGTGCTGCTCCACGGTCCTCCTGGCACTGGA
AAGACATCCCTGTGTAAAGCGTTAGCCCAGAAATTGACGATTAGACTTTCGAGCAGGTACCGATATGGCCAATTAATTGA
AATAAACAGCCACAGCCTCTTTTCTAAGTGGTTTTCGGAAAGTGGCAAGCTGGTAACCAAGATGTTTCAGAAGATTCAGG
ATTTGATTGATGATAAAGACGCTCTGGTGTTCGTGCTGATTGATGAGGTGGAGAGTCTCACAGCCGCCCGAAACGCCTGC
AGGGCGGGCACCGAGCCATCAGATGCCATCCGCGTGGTCAATGCTGTCTTGACCCAAATCGATCAGATTAAAAGGCATTC
CAATGTCGTGATTCTGACCACTTCCAACATCACCGAGAAGATCGACGTGGCCTTCGTGGACAGGGCTGACATCAAGCAAT
ACATTGGGCCGCCCTCTGTAGCAGCCATCTTCAAAATCTACCTCTCTTGTTTGGAAGAACTGATGAAGTGTCAGATCATA
TACCCTCGCCAGCAGCTGCTGACCCTCCGAGAGCTGGAGATGATCGGCTTCATTGAAAACAACGTGTCAAAATTGAGCCT
TCTTTTGAATGAAATTTCAAGGAAGAGCGAAGGCCTCAGCGGCCGGGTCCTGAGAAAACTCCCCTTTCTGGCTCATGCGC
TGTATGTCCAGGCCCCCACCGTCACCATAGAGGGGTTCCTCCAGGCCCTATCTCTGGCAGTGGACAAGCAGTTTGAAGAG
AGAAAGAAGCTTGCGGCTTACATCTGA
GTGCATCATCGCGGCAGCAGCACTGCAAAGAAAGAAGACATAACCCTGAGTGTTAGAAAGCTACTCAACAGACATAATAT
TGTGTTTGGGGATTACACATGGACTGAGTTTGATGAACCTTTTTTGACCAGAAATGTGCAGTCTGTGTCTATTGTTGACA
CAGAATTAAAGGTTAAAGACTCACAGCCCATCGATTTGAGTGCATGCACTGTTGCACTTCACATCTTCCAGCTGAATGAA
GATGGCCCCAGCAGTGAAAATCTGGAGGAAGAGACAGAAAACATAATTGCAGCAAATCACTGGGTTCTACCTGCAGCTGA
ATTCCATGGGCTTTGGGACAGCTTGGTGTATGATGTGGAAGTCAAATCCCACCTCCTCGATTATGTGATGACAACTTTAC
TGTTTTCAGACAAGAACGTCAACAGCAACCTCATCACCTGGAACCGGGTGGTGCTGCTCCACGGTCCTCCTGGCACTGGA
AAGACATCCCTGTGTAAAGCGTTAGCCCAGAAATTGACGATTAGACTTTCGAGCAGGTACCGATATGGCCAATTAATTGA
AATAAACAGCCACAGCCTCTTTTCTAAGTGGTTTTCGGAAAGTGGCAAGCTGGTAACCAAGATGTTTCAGAAGATTCAGG
ATTTGATTGATGATAAAGACGCTCTGGTGTTCGTGCTGATTGATGAGGTGGAGAGTCTCACAGCCGCCCGAAACGCCTGC
AGGGCGGGCACCGAGCCATCAGATGCCATCCGCGTGGTCAATGCTGTCTTGACCCAAATCGATCAGATTAAAAGGCATTC
CAATGTCGTGATTCTGACCACTTCCAACATCACCGAGAAGATCGACGTGGCCTTCGTGGACAGGGCTGACATCAAGCAAT
ACATTGGGCCGCCCTCTGTAGCAGCCATCTTCAAAATCTACCTCTCTTGTTTGGAAGAACTGATGAAGTGTCAGATCATA
TACCCTCGCCAGCAGCTGCTGACCCTCCGAGAGCTGGAGATGATCGGCTTCATTGAAAACAACGTGTCAAAATTGAGCCT
TCTTTTGAATGAAATTTCAAGGAAGAGCGAAGGCCTCAGCGGCCGGGTCCTGAGAAAACTCCCCTTTCTGGCTCATGCGC
TGTATGTCCAGGCCCCCACCGTCACCATAGAGGGGTTCCTCCAGGCCCTATCTCTGGCAGTGGACAAGCAGTTTGAAGAG
AGAAAGAAGCTTGCGGCTTACATCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 0 .17 RPM |
| SRP007412_cerebellum | 0 .12 RPM |
| SRP007412_heart | 0 .03 RPM |
| SRP007412_kidney | 0 .03 RPM |
| SRP007412_liver | 0 .21 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000007439 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000003849 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000015202 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000006144 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_1358 | 75.81 | 52.45 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000015309 retrocopies