Parental gene: | C5orf33, ENSPPYG00000015401 |
| Aliases: | None |
| Description: | None |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 5:37125127..37192491(-) |
>ENSPPYG00000015401
ATGAGAATGAGGATGATTTCATCCAAGTCACTAAAAATGGATCAGCTTGCATTGAAAGGCTCTAGTTACAGTGGACTTCT
TGAACGACATCATATTCACACCAAAAATGTAGAACATATTATAGATAGTTTACGGAATGAGGGAATTGAGGTTCGTCTAG
TAAAGAGGAGAGAATATGATGAAGAGACTGTTCGATGGGCAGATGCTGTCATAGCTGCAGGAGGTGATGGCACAATGCTG
CTGGCAGCAAGTAAAGTCTTGGACAGACTTAAACCAGTTATAGGGGTAAACACTGATCCAGAACGGTCTGAGGGTCATTT
ATGCCTGCCCGTTCGATATACACATTCCTTTCCAGAAGCCTTACAGAAGTTCTATCGTGGTGAGTTCAGGTGGTTGTGGA
GGCAGAGAATCAGGTTATACCTTGAAGGGACTGGCATAAACCCTGTTCCTGTGGACCTTCACGAGCAGCAGCTAAGCTTG
AATCAGCACAATAGAGCCCTTAACATTGAAAGAGCTCATGATGAAAGGTCTGAGGCTTCAGGACCCCAACTTCTGCCAGT
GAGAGCACTAAATGAAGTCTTCATTGGGGAGAGTCTGTCATCCAGAATGTCTTATTCTTGGGCTGTAGCAGTGGACAATT
TAAGAAGAAGTATACCCACTCTAAAGGGACTGGCTTCCTACTATGAGATTTCAGTTGATGATGGTCCATGGGAAAAACAG
AAGAGTTCAGGGCTGAATTTGTCTACTGGTACAGGATCAAAGGCCTGGTCATTCAATATTAACAGGGTTGCAACTCAGGC
TGTAGAAGATGTTTTAAATATTGCAAAACGACAAGGAAATTTGAGTCTTCCATTGAACAGAGAATTGGTAGAGAAAGTAA
CAAATGAATATAATGAATCACTGCTCTACAGTCCAGAAGAACCAAAAATACTTTTCAGTATTCGAGAACCAATAGCAAAT
AGAGTTTTCTCAAGCAGTCGTCAGCGTTGTTTCTCCTCAAAGGTTTGTGTTCGTTCTCGTTGTTGGGATGCCTGTATGGT
TGTGGATGGAGGAACTTCTTTTGAGTTTAATGATGGTGCAATTGCTTCGATGATGATCAATAAAGAAGATGAACTTCGAA
CTGTGCTTCTAGAACAGTGA
ATGAGAATGAGGATGATTTCATCCAAGTCACTAAAAATGGATCAGCTTGCATTGAAAGGCTCTAGTTACAGTGGACTTCT
TGAACGACATCATATTCACACCAAAAATGTAGAACATATTATAGATAGTTTACGGAATGAGGGAATTGAGGTTCGTCTAG
TAAAGAGGAGAGAATATGATGAAGAGACTGTTCGATGGGCAGATGCTGTCATAGCTGCAGGAGGTGATGGCACAATGCTG
CTGGCAGCAAGTAAAGTCTTGGACAGACTTAAACCAGTTATAGGGGTAAACACTGATCCAGAACGGTCTGAGGGTCATTT
ATGCCTGCCCGTTCGATATACACATTCCTTTCCAGAAGCCTTACAGAAGTTCTATCGTGGTGAGTTCAGGTGGTTGTGGA
GGCAGAGAATCAGGTTATACCTTGAAGGGACTGGCATAAACCCTGTTCCTGTGGACCTTCACGAGCAGCAGCTAAGCTTG
AATCAGCACAATAGAGCCCTTAACATTGAAAGAGCTCATGATGAAAGGTCTGAGGCTTCAGGACCCCAACTTCTGCCAGT
GAGAGCACTAAATGAAGTCTTCATTGGGGAGAGTCTGTCATCCAGAATGTCTTATTCTTGGGCTGTAGCAGTGGACAATT
TAAGAAGAAGTATACCCACTCTAAAGGGACTGGCTTCCTACTATGAGATTTCAGTTGATGATGGTCCATGGGAAAAACAG
AAGAGTTCAGGGCTGAATTTGTCTACTGGTACAGGATCAAAGGCCTGGTCATTCAATATTAACAGGGTTGCAACTCAGGC
TGTAGAAGATGTTTTAAATATTGCAAAACGACAAGGAAATTTGAGTCTTCCATTGAACAGAGAATTGGTAGAGAAAGTAA
CAAATGAATATAATGAATCACTGCTCTACAGTCCAGAAGAACCAAAAATACTTTTCAGTATTCGAGAACCAATAGCAAAT
AGAGTTTTCTCAAGCAGTCGTCAGCGTTGTTTCTCCTCAAAGGTTTGTGTTCGTTCTCGTTGTTGGGATGCCTGTATGGT
TGTGGATGGAGGAACTTCTTTTGAGTTTAATGATGGTGCAATTGCTTCGATGATGATCAATAAAGAAGATGAACTTCGAA
CTGTGCTTCTAGAACAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 24 .60 RPM |
| SRP007412_cerebellum | 16 .54 RPM |
| SRP007412_heart | 15 .41 RPM |
| SRP007412_kidney | 14 .15 RPM |
| SRP007412_liver | 100 .04 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Nomascus leucogenys | ENSNLEG00000016064 | ortholog_one2one | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000009281 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000016691 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_3323 | 61.02 | 65.44 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000015401 retrocopies