Parental gene: | HCN1, ENSPPYG00000015446 |
| Aliases: | None |
| Description: | hyperpolarization activated cyclic nucleotide-gated potassium channel 1 [Source:HGNC Symbol;Acc:4845] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 5:46560358..46999023(-) |
>ENSPPYG00000015446
ATGGAAGGAGGCGGCAAGCCCAACTCTTCGTCTAACAGCCGGGACGATGGCAACAGCGTCTTCCCCGCCAAGGCGTCCGC
GACGGGCGCGGGGCCGGCCGCGGCCGAGAAGCGCCTGGGCACCCCGCCGGGGGGCGGCGGGGCCGGCGCGAAGGAGCACG
GCAACTCCGTGTGCTTCAAGGTGGACGGCGGCGGCGGCGGCGAGGAGCCGGCCGGGGGTTTCGAAGACGCCGAGGGGCCC
CGGCGGCAGTACGGCTTCATGCAGAGGCAGTTCACCTCCATGCTGCAGCCCGGGGTCAACAAATTCTCCCTCCGCATGTT
TGGGAGCCAGAAAGCGGTGGAAAAGGAGCAGGAAAGGGTTAAAACTGCAGGCTTCTGGATTATCCACCCTTACAGTGATT
TCAGGTTTTACTGGGATTTAATAATGCTTATAATGATGGTTGGAAATCTAGTCATCATACCAGTTGGAATCACATTCTTT
ACAGAGCAAACAACAACACCGTGGATTATTTTCAATGTGGCATCAGATACAGTTTTCCTATTGGACCTGATCATGAATTT
TAGGACTGGGACTGTCAATGAAGACAGTTCTGAAATCATCCTGGACCCCAAAGTGATCAAGATGAATTATTTAAAAAGCT
GGTTTGTGGTTGACTTCATCTCATCCATCCCAGTGGATTATATCTTTCTTATTGTAGAAAAAGGAATGGATTCAGAAGTT
TACAAGACAGCCAGGGCACTTCGCATTGTGAGGTTTACAAAAATTCTCAGTCTCTTGCGTTTATTACGACTTTCAAGGTT
AATTAGATACATACATCAATGGGAAGAGATATTCCACATGACATATGATCTCGCCAGTGCAGTGGTGAGAATTTTTAATC
TCATCGGCATGATGCTGCTCCTGTGCCACTGGGATGGTTGTCTTCAGTTCTTAGTACCACTACTGCAGGACTTCCCACCA
GATTGCTGGGTGTCTTTAAATGAAATGGTTAATGATTCTTGGGGAAAGCAGTATTCATACGCCCTCTTCAAAGCTATGAG
TCACATGCTGTGCATTGGGTATGGAGCCCAAGCCCCAGTCAGCATGTCTGACCTCTGGATTACCATGCTGAGCATGATCG
TCGGTGCCACCTGCTATGCCATGTTTGTCGGCCATGCCACTGCTTTAATCCAGTCTCTGGATTCTTCCAGGCGGCAGTAT
CAAGAGAAGTATAAGCAAGTGGAACAATACATGTCATTCCATAAGTTACCAGCTGATATGCGTCAGAAGATACATGATTA
CTATGAACACAGATACCAAGGCAAAATCTTTGATGAGGAAAATATTCTCAATGAACTCAATGATCCTCTGAGAGAGGAGA
TAGTCAACTTCAACTGTCGGAAACTGGTGGCTACAATGCCTTTATTTGCTAATGCGGATCCTAATTTTGTGACTGCCATG
CTGAGCAAGTTGAGATTTGAGGTGTTTCAACCTGGAGATTATATCATACGAGAAGGAGCCGTGGGTAAAAAAATGTATTT
CATTCAACATGGTGTTGCTGGTGTCATTACAAAATCCAGTAAAGAAATGAAGCTGACAGATGGCTCTTACTTTGGAGAGA
TTTGCCTGCTGACCAAAGGACGTCGTACTGCCAGTGTTCGAGCTGATACATATTGTCGTCTTTACTCACTTTCCGTGGAC
AATTTCAACGAGGTCCTGGAGGAATATCCAATGATGAGGAGAGCCTTTGAGACAGTTGCCATTGACCGACTAGATCGAAT
AGGAAAGAAAAATTCAATTCTTCTGCAAAAGTTCCAGAAAGATCTGAACACTGGTGTTTTCAACAATCAGGAGAACGAAA
TCCTCAAGCAGATTGTGAAACATGACAGGGAGATGGTGCAGGCAATCGCTCCCATCAATTATCCTCAAATGACAACCCTG
AATTCCACATCGTCTACTACGACCCCGACCTCCCGCATGAGGACACAATCTCCACCGGTGTACACAGCGACCAGCCTGTC
TCACAGCAACCTGCACTCCCCCAGTCCCAGCACACAGACCCCCCAGCCATCAGCCATCCTGTCGCCTTGCTCCTACACCA
CCGCGGTCTGCAGCCCTCCTGTACAGAGCCCTCTGGCCGCTCGAACTTTCCACTATGCCTCCCCCACCGCCTCCCAGCTG
TCACTCATGCAACAGCAGCCGCAGCAGCAGGTACAGCAGTCCCAGCCGCCGCAGACTCAGCCACAGCAGCCGTCCCCGCA
GCCACAGACACCTGGCAGCTCCACGCCGAAAAATGAAGTGCACAAGAGCACGCAGGCGCTTCACAACACCAACCTGACCC
GGGAAGTCAGGCCCCTCTCCGCCTCGCAGCCCTCGCTGCCCCATGAGGTGTCCACTCTGATTTCCAGACCTCATCCCACT
GTGGGCGAGTCCCTGGCCTCCATCCCTCAACCCGTGACGGCGGTCCCCGGAACGGGCCTTCAGGCAGGGGGCAGGAGCAC
TGTCCCGCAGCGCGTCACCCTCTTCCGACAGATGTCGTCGGGAGCCATCCCCCCCAACCGAGGAGTCCCTCCAGCACCCC
CTCCACCAGCAGCTGCTCTTCCGAGAGAATCTTCCTCAGTCTTAAACACAGACCCAGACGCAGAAAAGCCACGATTTGCT
TCAAATTTATGA
ATGGAAGGAGGCGGCAAGCCCAACTCTTCGTCTAACAGCCGGGACGATGGCAACAGCGTCTTCCCCGCCAAGGCGTCCGC
GACGGGCGCGGGGCCGGCCGCGGCCGAGAAGCGCCTGGGCACCCCGCCGGGGGGCGGCGGGGCCGGCGCGAAGGAGCACG
GCAACTCCGTGTGCTTCAAGGTGGACGGCGGCGGCGGCGGCGAGGAGCCGGCCGGGGGTTTCGAAGACGCCGAGGGGCCC
CGGCGGCAGTACGGCTTCATGCAGAGGCAGTTCACCTCCATGCTGCAGCCCGGGGTCAACAAATTCTCCCTCCGCATGTT
TGGGAGCCAGAAAGCGGTGGAAAAGGAGCAGGAAAGGGTTAAAACTGCAGGCTTCTGGATTATCCACCCTTACAGTGATT
TCAGGTTTTACTGGGATTTAATAATGCTTATAATGATGGTTGGAAATCTAGTCATCATACCAGTTGGAATCACATTCTTT
ACAGAGCAAACAACAACACCGTGGATTATTTTCAATGTGGCATCAGATACAGTTTTCCTATTGGACCTGATCATGAATTT
TAGGACTGGGACTGTCAATGAAGACAGTTCTGAAATCATCCTGGACCCCAAAGTGATCAAGATGAATTATTTAAAAAGCT
GGTTTGTGGTTGACTTCATCTCATCCATCCCAGTGGATTATATCTTTCTTATTGTAGAAAAAGGAATGGATTCAGAAGTT
TACAAGACAGCCAGGGCACTTCGCATTGTGAGGTTTACAAAAATTCTCAGTCTCTTGCGTTTATTACGACTTTCAAGGTT
AATTAGATACATACATCAATGGGAAGAGATATTCCACATGACATATGATCTCGCCAGTGCAGTGGTGAGAATTTTTAATC
TCATCGGCATGATGCTGCTCCTGTGCCACTGGGATGGTTGTCTTCAGTTCTTAGTACCACTACTGCAGGACTTCCCACCA
GATTGCTGGGTGTCTTTAAATGAAATGGTTAATGATTCTTGGGGAAAGCAGTATTCATACGCCCTCTTCAAAGCTATGAG
TCACATGCTGTGCATTGGGTATGGAGCCCAAGCCCCAGTCAGCATGTCTGACCTCTGGATTACCATGCTGAGCATGATCG
TCGGTGCCACCTGCTATGCCATGTTTGTCGGCCATGCCACTGCTTTAATCCAGTCTCTGGATTCTTCCAGGCGGCAGTAT
CAAGAGAAGTATAAGCAAGTGGAACAATACATGTCATTCCATAAGTTACCAGCTGATATGCGTCAGAAGATACATGATTA
CTATGAACACAGATACCAAGGCAAAATCTTTGATGAGGAAAATATTCTCAATGAACTCAATGATCCTCTGAGAGAGGAGA
TAGTCAACTTCAACTGTCGGAAACTGGTGGCTACAATGCCTTTATTTGCTAATGCGGATCCTAATTTTGTGACTGCCATG
CTGAGCAAGTTGAGATTTGAGGTGTTTCAACCTGGAGATTATATCATACGAGAAGGAGCCGTGGGTAAAAAAATGTATTT
CATTCAACATGGTGTTGCTGGTGTCATTACAAAATCCAGTAAAGAAATGAAGCTGACAGATGGCTCTTACTTTGGAGAGA
TTTGCCTGCTGACCAAAGGACGTCGTACTGCCAGTGTTCGAGCTGATACATATTGTCGTCTTTACTCACTTTCCGTGGAC
AATTTCAACGAGGTCCTGGAGGAATATCCAATGATGAGGAGAGCCTTTGAGACAGTTGCCATTGACCGACTAGATCGAAT
AGGAAAGAAAAATTCAATTCTTCTGCAAAAGTTCCAGAAAGATCTGAACACTGGTGTTTTCAACAATCAGGAGAACGAAA
TCCTCAAGCAGATTGTGAAACATGACAGGGAGATGGTGCAGGCAATCGCTCCCATCAATTATCCTCAAATGACAACCCTG
AATTCCACATCGTCTACTACGACCCCGACCTCCCGCATGAGGACACAATCTCCACCGGTGTACACAGCGACCAGCCTGTC
TCACAGCAACCTGCACTCCCCCAGTCCCAGCACACAGACCCCCCAGCCATCAGCCATCCTGTCGCCTTGCTCCTACACCA
CCGCGGTCTGCAGCCCTCCTGTACAGAGCCCTCTGGCCGCTCGAACTTTCCACTATGCCTCCCCCACCGCCTCCCAGCTG
TCACTCATGCAACAGCAGCCGCAGCAGCAGGTACAGCAGTCCCAGCCGCCGCAGACTCAGCCACAGCAGCCGTCCCCGCA
GCCACAGACACCTGGCAGCTCCACGCCGAAAAATGAAGTGCACAAGAGCACGCAGGCGCTTCACAACACCAACCTGACCC
GGGAAGTCAGGCCCCTCTCCGCCTCGCAGCCCTCGCTGCCCCATGAGGTGTCCACTCTGATTTCCAGACCTCATCCCACT
GTGGGCGAGTCCCTGGCCTCCATCCCTCAACCCGTGACGGCGGTCCCCGGAACGGGCCTTCAGGCAGGGGGCAGGAGCAC
TGTCCCGCAGCGCGTCACCCTCTTCCGACAGATGTCGTCGGGAGCCATCCCCCCCAACCGAGGAGTCCCTCCAGCACCCC
CTCCACCAGCAGCTGCTCTTCCGAGAGAATCTTCCTCAGTCTTAAACACAGACCCAGACGCAGAAAAGCCACGATTTGCT
TCAAATTTATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 51 .09 RPM |
| SRP007412_cerebellum | 34 .53 RPM |
| SRP007412_heart | 0 .09 RPM |
| SRP007412_kidney | 0 .00 RPM |
| SRP007412_liver | 0 .28 RPM |
No homologs available
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_1279 | 78.09 | 55.61 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000015446 retrocopies