Parental gene: | TNPO1, ENSPPYG00000015545 |
| Aliases: | None |
| Description: | transportin-1 [Source:RefSeq peptide;Acc:NP_001125056] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 5:72878265..72969316(+) |
>ENSPPYG00000015545
ATGGTGTGGGACCGGCAAACCAAGATGGAGTATGAGTGGAAACCTGACGAGCAAGGGCTTCAGCAAATCCTGCAGCTGTT
GAAGGAGTCCCAGTCCCCAGACACCACCATCCAGAGAACCGTGCAACAAAAACTGGAACAACTTAATCAATATCCAGACT
TTAACAACTACTTGATTTTTGTTCTTACAAAATTAAAATCTGAAGATGAACCCACAAGATCATTGAGTGGTCTCATCTTG
AAGAATAATGTGAAAGCACACTTTCAGAACTTCCCAAATGGTGTAACAGACTTTATTAAAAGTGAATGTTTAAATAATAT
TGGTGACTCCTCTCCTCTGATTAGAGCCACTGTTGGTATTTTGATCACAACTATAGCCTCCAAGGGAGAATTGCAGAATT
GGCCTGATCTCTTACCAAAACTCTGTAGCCTGTTGGATTCTGAAGATTATAATACCTGTGAGGGAGCATTTGGTGCCCTT
CAGAAGATTTGTGAAGATTCTGCTGAGATTTTAGATAGTGATGTTTTAGATCGTCCTCTCAACATCATGATTCCCAAATT
TTTACAGTTCTTCAAGCATAGTAGTCCAAAAATAAGGTCTCATGCTGTTGCATGTGTCAATCAGTTTATCATCAGTAGGA
CTCAAGCTCTGATGTTGCACATTGATTCTTTTATTGAGAATCTCTTTGCATTAGCTGGTGATGAAGAACCAGAGGTACGG
AAAAATGTGTGCCGAGCACTTGTGATGTTGCTCGAAGTTCGAATGGATCGCCTGCTTCCTCACATGCATAATATAGTTGA
GTACATGCTACAGAGGACTCAAGATCAAGATGAAAATGTGGCTTTAGAAGCCTGTGAATTTTGGCTAACTTTAGCTGAAC
AGCCAATATGCAAAGATGTACTCGTAAGGCATCTTCCTAAGTTGATTCCTGTGGTGAATGGCATGAAGTACTCAGATATA
GATATTATCCTACTTAAGGGTGATGTTGAAGAAGACGAAACGATTCCTGATAGTGAACAGGATATACGGCCACGTTTTCA
CCGATCAAGGACGGTGGCTCAGCAGCATGATGAAGATGGAATTGAAGAGGAAGATGATGATGATGATGAAATTGATGATG
ATGATACAATTTCTGACTGGAATCTAAGAAAATGTTCTGCTGCTGCCCTAGATGTTCTTGCAAATGTGTATCGTGATGAA
CTGCTGCCACATATTTTGCCCCTTTTGAAAGAATTACTTTTTCATCATGAATGGGTTGTTAAAGAATCAGGCATTTTGGT
TTTAGGAGCAATTGCTGAAGGTTGCATGCAGGGCATGATTCCATACTTGCCTGAGCTTATTCCTCACCTTATTCAGTGCC
TCTCTGATAAAAAGGCTCTTGTGCGTTCCATAACATGCTGGACTCTTAGCCGCTATGCACACTGGGTAGTCAGCCAGCCA
CCAGACACGTACCTGAAGCCATTAATGACAGAATTGCTAAAGCGCATCCTGGATAGCAACAAGAGAGTACAAGAAGCTGC
CTGCAGTGCCTTTGCTACCCTAGAAGAGGAGGCTTGTACAGAACTTGTTCCTTACCTTGCTTATATACTTGATACCCTGG
TCTTTGCATTTAGTAAATACCAGCATAAGAACCTGCTCATTCTTTACGATGCCATAGGAACATTAGCAGATTCAGTAGGA
CATCATTTAAACAAACCAGAATATATTCAGATGCTAATGCCTCCACTGATCCAGAAATGGAACATGTTAAAGGATGAAGA
TAAAGATCTCTTCCCTTTACTTGAGTGCCTATCTTCGGTTGCCACAGCACTGCAGTCTGGCTTCCTTCCATACTGTGAAC
CTGTGTATCAGCGTTGTGTAAACCTAGTACAGAAGACTCTTGCACAAGCCATGCTAAACAATGCTCAACCAGATCAATAT
GAAGCTCCAGATAAAGATTTTATGATAGTGGCTCTTGATTTACTGAGTGGCCTGGCTGAAGGACTTGGAGGCAACATTGA
ACAGCTGGTAGCCCGAAGTAATATCCTAACACTAATGTATCAGTGCATGCAGGATAAAATGCCAGAAGTTCGACAGAGTT
CTTTTGCCCTGTTAGGTGACCTCACAAAAGCTTGCTTTCAGCATGTTAAGCCTTGTATAGCTGATTTCATGCCAATATTG
GGAACCAACCTAAATCCAGAATTCATTTCAGTCTGCAACAATGCCACATGGGCAATTGGAGAAATCTCCATTCAAATGGG
TATAGAGATGCAGCCTTATATTCCTATGGTGTTGCACCAGCTTGTAGAAATCATTAACAGACCCAACACACCAAAGACGT
TGTTAGAGAATACAGCAATAACAATTGGTCGTCTTGGTTACGTTTGTCCTCAAGAGGTGGCCCCCATGCTACAGCAGTTT
ATAAGACCCTGGTGCACCTCTCTGAGAAACATAAGAGACAATGAGGAAAAGGATTCAGCATTCCGTGGAATTTGTACCAT
GATCAGTGTGAATCCCAGTGGCGTAATCCAAGATTTTATATTTTTTTGTGATGCCGTTGCATCATGGATTAACCCAAAAG
ATGATCTCAGAGACATGTTCTGTAAGATCCTTCATGGATTTAAAAATCAAGTTGGTGATGAAAATTGGAGGCGTTTCTCT
GACCAGTTTCCTCTTCCCTTAAAAGAGCGTCTTGCAGCTTTTTATGGTGTTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 9 .73 RPM |
| SRP007412_cerebellum | 22 .74 RPM |
| SRP007412_heart | 13 .79 RPM |
| SRP007412_kidney | 16 .01 RPM |
| SRP007412_liver | 11 .11 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000083312 | ortholog_one2one | 2 retrogenes | |
| Mus musculus | ENSMUSG00000009470 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000016972 | ortholog_one2one | 2 retrogenes | |
| Tursiops truncatus | ENSTTRG00000000209 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_1528 | 91.17 | 57.97 | Please wait, loading  |
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Download FASTA sequences of all ENSPPYG00000015545 retrocopies