Parental gene: | FSCN1, ENSPPYG00000017337 |
| Aliases: | None |
| Description: | fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus) [Source:HGNC Symbol;Acc:11148] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 7:5633592..5646943(+) |
>ENSPPYG00000017337
CTCTCGTCCACCGCCACCATGACCGCCAACGGCACAGCCGAGGCGGTGCAGATCCAGTTCGGCCTCATCAACTGCGGCAA
CAAGTACCTGACGGCCGAGGCGTTTGGGTTCAAGGTGAACGCGTCGGCCAGCAGCCTGAAGAAGAAGCAGATCTGGACGC
TGGAGCAGCCCCCTGACGAGGCGGGCAGCGCGGCCGTGTGCCTGCGCAGCCACCTGGGCCGCTACCTGGCGGCGGACAAG
GACGGCAACGTGACCTGCGAGCGCGAGGTGCCCGGTCCAGACTGCCGCTTCCTCATCGTGGCGCACGACGACGGCCGCTG
GTCGCTGCAGTCCGAGGCGCACCGGCGCTACTTCGGCGGCACCGAGGACCGCCTGTCGTGCTTCGCGCAGACGGTGTCCC
CCGCCGAGAAGTGGAGCGTGCACATCGCCATGCACCCTCAGGTCAACATCTACAGCGTCACCCGTAAGCGCTACGCGCAC
CTGAGCGCGCGGCCGGCCGACGAGATCGCCGTGGACCGCGACGTGCCCTGGGGCGTCGACTCGCTCATCACCCTCGCCTT
CCAGGACCAGCGCTACAGCGTGCAGACCGCCGACCACCGCTTCCTGCGCCACGACGGGCGCCTGGTGGCGCGCCCCGAGC
CGGCCACTGGCTACACGCTGGAGTTCCGCTCCGGCAAGGTGGCCTTCCGCGACTGCGAGGGCCGTTACCTGGCGCCGTCG
GGGCCCAGCGGCACGCTCAAGGCGGGCAAGGCCACCAAGGTGGGCAAAGACGAGCTATTTGCCCTGGAGCAGAGCTGCGC
CCAGGTCGTGCTGCAGGCGGCCAACGAGAGGAACGTGTCCACGCGCCAGGGTATGGACCTCTCTGCCAATCAGGACGAGG
AGACCGACCAGGAGACCTTCCAGCTGGAGATCGACCGCGACACCAAAAAGTGTGCCTTCCGTACCCACACGGGCAAGTAC
TGGACGCTGACGGCCACCGGGGGCGTGCAGTCCACCGCCTCCACCAAGAATGCCAGCTGCTACTTCGACATCGAGTGGCG
TGACCGGCGCATCACACTGCGGGCGTCCAATGGCAAGTTTGTGACCTCTAAGAAGAATGGGCAGCTGGCCGCCTCGGTGG
AGACAGCAGGGGACTCCACAGGCAAATACTGGACGGTGGGCAGTGACTCCGCGGTCACCAGCAGCGGCGACACTCCTGTG
GACTTCTTCTTCGAGTTCTGCGACTACAACAAGGTGGCCATCAAGGTGGGCGGGCGCTACCTGAAGGGCGACCACGCAGG
GGTCCTGAAGGCCTCGGCGGAGACCGTGGACCCCGCCTCGCTCTGGGAGTACTAG
CTCTCGTCCACCGCCACCATGACCGCCAACGGCACAGCCGAGGCGGTGCAGATCCAGTTCGGCCTCATCAACTGCGGCAA
CAAGTACCTGACGGCCGAGGCGTTTGGGTTCAAGGTGAACGCGTCGGCCAGCAGCCTGAAGAAGAAGCAGATCTGGACGC
TGGAGCAGCCCCCTGACGAGGCGGGCAGCGCGGCCGTGTGCCTGCGCAGCCACCTGGGCCGCTACCTGGCGGCGGACAAG
GACGGCAACGTGACCTGCGAGCGCGAGGTGCCCGGTCCAGACTGCCGCTTCCTCATCGTGGCGCACGACGACGGCCGCTG
GTCGCTGCAGTCCGAGGCGCACCGGCGCTACTTCGGCGGCACCGAGGACCGCCTGTCGTGCTTCGCGCAGACGGTGTCCC
CCGCCGAGAAGTGGAGCGTGCACATCGCCATGCACCCTCAGGTCAACATCTACAGCGTCACCCGTAAGCGCTACGCGCAC
CTGAGCGCGCGGCCGGCCGACGAGATCGCCGTGGACCGCGACGTGCCCTGGGGCGTCGACTCGCTCATCACCCTCGCCTT
CCAGGACCAGCGCTACAGCGTGCAGACCGCCGACCACCGCTTCCTGCGCCACGACGGGCGCCTGGTGGCGCGCCCCGAGC
CGGCCACTGGCTACACGCTGGAGTTCCGCTCCGGCAAGGTGGCCTTCCGCGACTGCGAGGGCCGTTACCTGGCGCCGTCG
GGGCCCAGCGGCACGCTCAAGGCGGGCAAGGCCACCAAGGTGGGCAAAGACGAGCTATTTGCCCTGGAGCAGAGCTGCGC
CCAGGTCGTGCTGCAGGCGGCCAACGAGAGGAACGTGTCCACGCGCCAGGGTATGGACCTCTCTGCCAATCAGGACGAGG
AGACCGACCAGGAGACCTTCCAGCTGGAGATCGACCGCGACACCAAAAAGTGTGCCTTCCGTACCCACACGGGCAAGTAC
TGGACGCTGACGGCCACCGGGGGCGTGCAGTCCACCGCCTCCACCAAGAATGCCAGCTGCTACTTCGACATCGAGTGGCG
TGACCGGCGCATCACACTGCGGGCGTCCAATGGCAAGTTTGTGACCTCTAAGAAGAATGGGCAGCTGGCCGCCTCGGTGG
AGACAGCAGGGGACTCCACAGGCAAATACTGGACGGTGGGCAGTGACTCCGCGGTCACCAGCAGCGGCGACACTCCTGTG
GACTTCTTCTTCGAGTTCTGCGACTACAACAAGGTGGCCATCAAGGTGGGCGGGCGCTACCTGAAGGGCGACCACGCAGG
GGTCCTGAAGGCCTCGGCGGAGACCGTGGACCCCGCCTCGCTCTGGGAGTACTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 36 .22 RPM |
| SRP007412_cerebellum | 5 .84 RPM |
| SRP007412_heart | 0 .90 RPM |
| SRP007412_kidney | 4 .94 RPM |
| SRP007412_liver | 7 .04 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000075618 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000001028 | ortholog_one2one | 1 retrogene | |
| Ornithorhynchus anatinus | ENSOANG00000030243 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_1225 | 93.95 | 85.36 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_3201 | 93.93 | 85.36 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_3544 | 92.37 | 85.36 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000017337 retrocopies