Parental gene:

IGF2BP3, ENSPPYG00000017730

Aliases:None
Description:insulin-like growth factor 2 mRNA binding protein 3 [Source:HGNC Symbol;Acc:28868]
Organism:Orangutan (Pongo abelii)
Coordinates:7:60968501..61125093(+)


>ENSPPYG00000017730
ATGAACAAACTGTATATCGGAAACCTCAGCGAGAACGCCGCCCCCTCGGACCTAGAAAGTATCTTCAAGGACGCCAAGAT
CCCGGTGTCGGGTCCTTTCCTGATGAAGACTGGACTACGCGTTNNNNNNNNNNNNNNNNNNNNNNNNNCCCTCAAGGCCA
TCGAGGCGCTTTCAGGTAAAATAGAACTGCACGGGAAACCCATAGAAGTTGAGCACTCGGTCCCAAAAAGGCAAAGGATT
CGGAAACTTCAGATACGAAATATCCCGCCTCATTTACAGTGGGAGGTGCTGGATAGTTTACTAGTCCAGTATGGAGTGGT
GGAGAGCTGTGAGCAAGTGAACACTGACTCGGAAACTGCAGTTGTAAATGTAACCTATTCCAGTAAGGACCAAGCTAGAC
AAGCACTAGACAAACTGAATGGATTTCAGTTAGAGAATTTCACCTTGAAAGTAGCCTATATCCCTGATGAAATGGCCGCC
CAGCAAAACCCCTTGCAGCAGCCCCGAGGTCGCCGGGGGCTTGGGCAGAGGGGCTCATCAAGGCAGGGGTCTCCAGGATC
TGTGTCCAAGCAGAAACCATGTGATTTGCCTCTGCGCCTGCTGGTTCCCACCCAGTTTGTTGGAGCCATCATAGGAAAAG
AAGGTGCCACCATTCGGAACATCACCAAACAGACCCAGTCTAAAATCGATGTCCACCGTAAAGAAAATGCAGGGGCTGCT
GAGAAGTCGATTACTATCCTCTCTACTCCTGAAGGCACCTCTGCGGCTTGTAAGTCTATTCTGGAGATTATGCATAAGGA
AGCTCAAGATATAAAATTCACAGAAGAGATCCCCTTGAAGATTTTAGCTCATAATAACTTTGTTGGCCGTCTTATTGGTA
AAGAAGGAAGAAATCTTAAAAAAATTGAGCAAGACACAGACACTAAAATCACGATATCTCCATTGCAGGAATTGACGCTG
TATAATCCAGAACGCACCATTACAGTTAAAGGCAATGTTGAGACATGTGCCAAAGCTGAGGAGGAGATCATGAAGAAAAT
CAGGGAGTCTTATGAAAATGATATTGCTTCTATGAATCTTCAAGCACATTTAATTCCTGGATTAAATCTGAACGCCTTGG
GTCTGTTCCCACCCACTTCAGGGATGCCACCTCCCACCTCAGGGCCCCCTTCAGCCATGACTCCTCCCTACCCGCAGTTT
GAGCAATCAGAAACAGAGACTGTTCATCTGTTTATCCCAGCTCTATCAGTCGGTGCCATCATCGGCAAGCAGGGCCAGCA
CATCAAGCAGCTTTCTCGCTTTGCTGGAGCTTCAATTAAGATTGCTCCAGCGGAAGCACCAGATGCTAAAGTGAGGATGG
TGATTATCACTGGACCACCGGAGGCTCAGTTCAAGGCTCAGGGAAGAATTTATGGAAAAATTAAAGAAGAAAACTTTGTT
AGTCCTAAAGAAGAGGTGAAACTTGAAGCTCATATCAGAGTGCCATCCTTTGCTGCTGGCAGAGTTATTGGAAAAGGAGG
CAAAACGGTGAATGAACTTCAGAATTTGTCAAGTGCAGAAGTTGTTGTCCCTCGTGACCAGACACCTGATGAGAATGACC
AAGTGGTTGTCAAAATAACTGGTCACTTCTATGCTTGCCAGGTTGCCCAGAGAAAAATTCAGGAAATTCTGACTCAGGTA
AAGCAGCACCAACAACAGAAGGCTCTGCAAAGTGGACCACCTCAGTCAAGACGGAAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 0 .11 RPM
SRP007412_cerebellum 0 .49 RPM
SRP007412_heart 0 .06 RPM
SRP007412_kidney 0 .20 RPM
SRP007412_liver 0 .09 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000002341 ortholog_one2one 1 retrogene
retro_chof_828,
Homo sapiens ENSG00000136231 ortholog_one2one 1 retrogene
retro_hsap_3690,
Gorilla gorilla ENSGGOG00000010286 ortholog_one2one 1 retrogene
retro_ggor_2520,
Nomascus leucogenys ENSNLEG00000014780 ortholog_one2one 1 retrogene
retro_nleu_2277,
Pongo abelii ENSPPYG00000014373 within_species_paralog 3 retrogenes
retro_pabe_1723, retro_pabe_281, retro_pabe_837,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_3023 91.80 77.37
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Download FASTA sequences of all ENSPPYG00000017730 retrocopies