Parental gene: | DCAF13, ENSPPYG00000018809 |
| Aliases: | DCAF13, WDSOF1 |
| Description: | DDB1- and CUL4-associated factor 13 [Source:RefSeq peptide;Acc:NP_001126898] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 8:110052172..110081183(+) |
>ENSPPYG00000018809
ATGAAGGTGAAGATGCTGAGCCGGAATCCGGACAATTATGTCCGCGAAACCAAGTTGGACTTACAGAGAGTTCCAAGAAA
CTATGATCCTACTTTACATCCTTTTGAGGTCCCACGAGAGTATGTAAGAGCTTTAAATGCTACCAAACTGGAACGAGTAT
TTGCAAAACCATTCCTTGCTTCACTGGATGGTCACCGTGATGGAGTCAATTGCTTGGCAAAGCATCCAAAGAACCTGGCT
ACTGTCCTTTCTGGGGCATGTGATGGAGAGGTTAGAATTTGGAACCTAACTCAGCGGAATTGTATCCGTACAATACAAGC
ACATGAAGGCTTTGTACGAGGAATATGTACCCGCTTTTGTGGGACTTCTTTTTTCACTGTTGGTGATGACAAAACTGTGA
AGCAGTGGAAAATGGATGGGCCAGGCTATGGAGACGAGGAAGAGCCATTACATACAATATTAGGAAAGACAGTGTATACT
GGGATTGATCATCACTGGAAAGAAGCTGTTTTTGCCACATGTGGACAGCAAGTAGACATTTGGGATGAACAAAGAACTAA
TCCTGTATGTTCAATGACCTGGGGATTTGACAGTATAAGTAGTGTTAAATTTAACCCAATTGAGACATTTCTCTTGGGAA
GTTGTGCATCTGACAGGAATATAGTACTGTACGATATGAGGCAAGCTACTCCTTTGAAAAAGGTTATCTTAGATATGAGA
ACAAATACAATCTGTTGGAACCCTATGGAAGCTTTCATTTTTACAGCAGCAAATGAAGATTATAACTTATATACTTTTGA
TATGCGTGCACTGGACACTCCTGTAATGGTCCATATGGATCATGTATCTGCAGTGCTTGATGTGGATTACTCTCCCACTG
GGAAGGAGTTTGTGTCTGCTAGTTTCGATAAATCTATTCGAATCTTTCCTGTAGACAAAAGTCGAAGCAGGGAGGTATAT
CATACAAAGAGAATGCAACATGTTATCTGTGTAAAATGGACTTCTGACAGCAAGTATATTATGTGTGGATCTGATGAAAT
GAACATTCGCCTGTGGAAAGCTAATGCTTCTGAAAAATTGGGTGTGCTTACATCACGAGAAAAAGCAGCCAAGGATTATA
ACCAGAAATTGAAGGAGAAATTTCAGCATTATCCTCATATAAAACGTATAGCTCGTCATCGACATCTACCAAAATCTATC
TACAGCCAGATTCAGGAACAGCGCATCATGAAAGAAGCTCGTCGACGAAAGGAAGTGAATCGTATTAAACACAGCAAGCC
TGGATCTGTGCCAATTGTGTCAGAGAAGAAGAAACACGTAGTGGCAGTTGTAAAATAA
ATGAAGGTGAAGATGCTGAGCCGGAATCCGGACAATTATGTCCGCGAAACCAAGTTGGACTTACAGAGAGTTCCAAGAAA
CTATGATCCTACTTTACATCCTTTTGAGGTCCCACGAGAGTATGTAAGAGCTTTAAATGCTACCAAACTGGAACGAGTAT
TTGCAAAACCATTCCTTGCTTCACTGGATGGTCACCGTGATGGAGTCAATTGCTTGGCAAAGCATCCAAAGAACCTGGCT
ACTGTCCTTTCTGGGGCATGTGATGGAGAGGTTAGAATTTGGAACCTAACTCAGCGGAATTGTATCCGTACAATACAAGC
ACATGAAGGCTTTGTACGAGGAATATGTACCCGCTTTTGTGGGACTTCTTTTTTCACTGTTGGTGATGACAAAACTGTGA
AGCAGTGGAAAATGGATGGGCCAGGCTATGGAGACGAGGAAGAGCCATTACATACAATATTAGGAAAGACAGTGTATACT
GGGATTGATCATCACTGGAAAGAAGCTGTTTTTGCCACATGTGGACAGCAAGTAGACATTTGGGATGAACAAAGAACTAA
TCCTGTATGTTCAATGACCTGGGGATTTGACAGTATAAGTAGTGTTAAATTTAACCCAATTGAGACATTTCTCTTGGGAA
GTTGTGCATCTGACAGGAATATAGTACTGTACGATATGAGGCAAGCTACTCCTTTGAAAAAGGTTATCTTAGATATGAGA
ACAAATACAATCTGTTGGAACCCTATGGAAGCTTTCATTTTTACAGCAGCAAATGAAGATTATAACTTATATACTTTTGA
TATGCGTGCACTGGACACTCCTGTAATGGTCCATATGGATCATGTATCTGCAGTGCTTGATGTGGATTACTCTCCCACTG
GGAAGGAGTTTGTGTCTGCTAGTTTCGATAAATCTATTCGAATCTTTCCTGTAGACAAAAGTCGAAGCAGGGAGGTATAT
CATACAAAGAGAATGCAACATGTTATCTGTGTAAAATGGACTTCTGACAGCAAGTATATTATGTGTGGATCTGATGAAAT
GAACATTCGCCTGTGGAAAGCTAATGCTTCTGAAAAATTGGGTGTGCTTACATCACGAGAAAAAGCAGCCAAGGATTATA
ACCAGAAATTGAAGGAGAAATTTCAGCATTATCCTCATATAAAACGTATAGCTCGTCATCGACATCTACCAAAATCTATC
TACAGCCAGATTCAGGAACAGCGCATCATGAAAGAAGCTCGTCGACGAAAGGAAGTGAATCGTATTAAACACAGCAAGCC
TGGATCTGTGCCAATTGTGTCAGAGAAGAAGAAACACGTAGTGGCAGTTGTAAAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 11 .06 RPM |
| SRP007412_cerebellum | 21 .52 RPM |
| SRP007412_heart | 11 .41 RPM |
| SRP007412_kidney | 33 .41 RPM |
| SRP007412_liver | 16 .19 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000001595 | ortholog_one2one | 3 retrogenes | |
| Canis familiaris | ENSCAFG00000000663 | ortholog_one2one | 3 retrogenes | |
| Callithrix jacchus | ENSCJAG00000016181 | ortholog_one2one | 2 retrogenes | |
| Felis catus | ENSFCAG00000027256 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000164934 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000015124 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000007375 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000003791 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000002277 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000020493 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000006588 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_1249 | 88.37 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_3211 | 83.88 | 60.90 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000018809 retrocopies