Parental gene: | RLIM, ENSPPYG00000020481 |
| Aliases: | None |
| Description: | ring finger protein, LIM domain interacting [Source:HGNC Symbol;Acc:13429] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | X:72075519..72098619(-) |
>ENSPPYG00000020481
ATGGAAAACTCAGATTCCAATGACAAAGGAAGTGGTGATCAGTCTGCAGCACAGCGCAGAAGTCAGATGGACCGATTGGA
TCGGGAAGAAGCTTTCTATCAATTTGTAAATAACCTGAGTGAAGAAGATTATAGGCTTATGAGAGATAACAATTTGCTAG
GCACCCCAGGTGAAAGTACTGAGGAAGAGTTGCTGAGAAGACTACAGCAAATTAAAGAAGGCCCACCACCGCAAAACTCA
GATGAAAATAGAGGAGGAGACTCTTCAGATGATGTGTCTAATGGTGACTCTATAATAGACTGGCTTAACTCTGTCAGACA
AACTGGAAATACAACAAGAAGTGGGCAAAGAGGAAACCAATCTTGGAGAGCAGTGAGTCGGACTAATCCAAACAGTGGTG
ATTTCAGATTCAGTTTAGAGATAAATGTTAACCGTAATAATGGGAGCCAAAATTCAGAGAATGAAAATGAGCCATCTGCA
AGACGTTCTAGTGGAGAAAATGTGGAAAACAACAGCCAAAGGCAAGTGGAAAACCCACGATCTGAATCAACATCTGCAAG
GCCATCTAGATCAGAACGAAATTCAACTGAAGCATTAACAGAGGTCCCACCTACCAGAGGTCAGAGGAGGGCAAGAAGCA
GGAGCCCAGACCATCGGAGAACCAGAGCAAGAGCTGAGAGAAGTAGGTCACCTCTGCATCCAATGAGTGAAATTCCACGA
AGATCTCATCATAGTATCTCATCTCAGACTTTTGAACATCCTTTGGTAAATGAGACGGAGGGAAGTTCTAGAACCCGGCA
CCATGTGACATTGAGGCAGCAAATATCTGGGCCTGAGTTGCTAAGTAGAGGTCTTTTTGCAGCTTCTGGAACAAGAAATG
CTTCTCAAGGAACAGGTTCTTCAGACACAGCTGCCAATGGTGAATCTACAGGATCAGGACAGAGACCTCCAACCATAGTC
CTTGATCTTCAAGTAAGAAGAGTTCGTCCTGGAGAATATCGGCAGAGAGATAGCATAGCCAGCAGAACTCGGTCTAGGTC
TCAGACGCCAAACAACACTGTCACCTACGAAAGTGAACGAGGAGGTTTTAGGCGTACATTTTCACGTTCTGAGCGGGCAG
GTGTGAGAACCTATGTCAGTACCATCAGAATTCCCATTCGTAGAATCTTAAATACTGGTTTAAGTGAGACTACATCTGTT
GCAATTCAGACCATGTTAAGGCAGATAATGACAGGTTTTGGTGAGTTAAGCTATTTTATGTACAGTGATAGCGACTCAGA
GCCTACTGGCTCAGTCTCAAATCGAAATATGGAAAGGGCAGAGTCACGGAGTGGAAGAGGAGGTTCTGGTGGTGGTAGTA
GTTCTGGTTCCAGTTCGAGTTCCAGTTCGAGTTCAAGTTCCAGTTCCAGTTCAAGTTCCAGTTCCAGTCCTAGTTCCAGT
TCCGGTGGTGAAAGTTCAGAAACTAGCTCAGATTTATTTGAAGGCAGTAATGAAGGAAGCTCATCATCAGGCTCATCAGG
TGCCAGGCGAGAGGGTCGACATAGGGCCCCAGTCACATTTGATGAAAGTGGCTCTTTGCCCTTCCTTAGCCTGGCTCAGT
TTTTCCTCTTAAATGAGGATGATGATGACCAACCTAGAGGACTCACCAAAGAACAGATTGACAACTTGGCAATGAGAAGT
TTTGGTGAAAATGATGCATTAAAAACCTGTAGTGTTTGCATTACAGAATATACAGAAGGCAACAAACTTCGTAAACTGCC
TTGTTCCCATGAGTACCATGTCCACTGCATCGATCGCTGGTTATCTGAGAATTCTACCTGTCCTATTTGTCGCAGAGCAG
TCTTAGCTTCTGGTAACAGAGAAAGTGTTGTGTAA
ATGGAAAACTCAGATTCCAATGACAAAGGAAGTGGTGATCAGTCTGCAGCACAGCGCAGAAGTCAGATGGACCGATTGGA
TCGGGAAGAAGCTTTCTATCAATTTGTAAATAACCTGAGTGAAGAAGATTATAGGCTTATGAGAGATAACAATTTGCTAG
GCACCCCAGGTGAAAGTACTGAGGAAGAGTTGCTGAGAAGACTACAGCAAATTAAAGAAGGCCCACCACCGCAAAACTCA
GATGAAAATAGAGGAGGAGACTCTTCAGATGATGTGTCTAATGGTGACTCTATAATAGACTGGCTTAACTCTGTCAGACA
AACTGGAAATACAACAAGAAGTGGGCAAAGAGGAAACCAATCTTGGAGAGCAGTGAGTCGGACTAATCCAAACAGTGGTG
ATTTCAGATTCAGTTTAGAGATAAATGTTAACCGTAATAATGGGAGCCAAAATTCAGAGAATGAAAATGAGCCATCTGCA
AGACGTTCTAGTGGAGAAAATGTGGAAAACAACAGCCAAAGGCAAGTGGAAAACCCACGATCTGAATCAACATCTGCAAG
GCCATCTAGATCAGAACGAAATTCAACTGAAGCATTAACAGAGGTCCCACCTACCAGAGGTCAGAGGAGGGCAAGAAGCA
GGAGCCCAGACCATCGGAGAACCAGAGCAAGAGCTGAGAGAAGTAGGTCACCTCTGCATCCAATGAGTGAAATTCCACGA
AGATCTCATCATAGTATCTCATCTCAGACTTTTGAACATCCTTTGGTAAATGAGACGGAGGGAAGTTCTAGAACCCGGCA
CCATGTGACATTGAGGCAGCAAATATCTGGGCCTGAGTTGCTAAGTAGAGGTCTTTTTGCAGCTTCTGGAACAAGAAATG
CTTCTCAAGGAACAGGTTCTTCAGACACAGCTGCCAATGGTGAATCTACAGGATCAGGACAGAGACCTCCAACCATAGTC
CTTGATCTTCAAGTAAGAAGAGTTCGTCCTGGAGAATATCGGCAGAGAGATAGCATAGCCAGCAGAACTCGGTCTAGGTC
TCAGACGCCAAACAACACTGTCACCTACGAAAGTGAACGAGGAGGTTTTAGGCGTACATTTTCACGTTCTGAGCGGGCAG
GTGTGAGAACCTATGTCAGTACCATCAGAATTCCCATTCGTAGAATCTTAAATACTGGTTTAAGTGAGACTACATCTGTT
GCAATTCAGACCATGTTAAGGCAGATAATGACAGGTTTTGGTGAGTTAAGCTATTTTATGTACAGTGATAGCGACTCAGA
GCCTACTGGCTCAGTCTCAAATCGAAATATGGAAAGGGCAGAGTCACGGAGTGGAAGAGGAGGTTCTGGTGGTGGTAGTA
GTTCTGGTTCCAGTTCGAGTTCCAGTTCGAGTTCAAGTTCCAGTTCCAGTTCAAGTTCCAGTTCCAGTCCTAGTTCCAGT
TCCGGTGGTGAAAGTTCAGAAACTAGCTCAGATTTATTTGAAGGCAGTAATGAAGGAAGCTCATCATCAGGCTCATCAGG
TGCCAGGCGAGAGGGTCGACATAGGGCCCCAGTCACATTTGATGAAAGTGGCTCTTTGCCCTTCCTTAGCCTGGCTCAGT
TTTTCCTCTTAAATGAGGATGATGATGACCAACCTAGAGGACTCACCAAAGAACAGATTGACAACTTGGCAATGAGAAGT
TTTGGTGAAAATGATGCATTAAAAACCTGTAGTGTTTGCATTACAGAATATACAGAAGGCAACAAACTTCGTAAACTGCC
TTGTTCCCATGAGTACCATGTCCACTGCATCGATCGCTGGTTATCTGAGAATTCTACCTGTCCTATTTGTCGCAGAGCAG
TCTTAGCTTCTGGTAACAGAGAAAGTGTTGTGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 10 .78 RPM |
| SRP007412_cerebellum | 10 .09 RPM |
| SRP007412_heart | 4 .61 RPM |
| SRP007412_kidney | 5 .80 RPM |
| SRP007412_liver | 4 .04 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000131263 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000009249 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000022037 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_1245 | 85.74 | 81.41 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000020481 retrocopies