Parental gene: | ENSPSIG00000003379 |
| Aliases: | None |
| Description: | None |
| Organism: | Chinese softshell turtle (Pelodiscus sinensis) |
| Coordinates: | JH210644.1:87803..92945(-) |
>ENSPSIG00000003379
AGAAATGTCAAGCGCAAGTATTTGGAGGACTACATCAAATTCAGCTTCACTTGTCAAGAAAAAGGCATGGATTTGCCACA
ATGTGTTGTTTCAGTTTTGGGGAATGACTCAATGAAGCCGGCTAAGCTGAAACTCCATCTTGAAAAGTGTCACCCCAACT
TGTTGCAAAAGGATGAAGATTATTTTGAGTGTCTGAAACGGCAGCACTTCGACTCCACAAGTGCATTCTACAATAAGACA
AGCAATGCAGTGCGCGCTTCCTACATTGTTGCATACAAAGTTACACAGGCCAAGAAGCCGCATACCATTGTAGAGCAACT
CGTGCTCCCCTGTGCAAAAGAGATGATGCGGCTTGTTCTTGGTGAGGAAGCAGCAAGGAAGCTGAATGATATATCTGTCT
CTAACGACACACTATCGAGACGGATAAATGAGCTATCACAGAACATCAGTGAACAAGTTGTGGATGAAATAAAGACGTCT
CCATTGTTTACCATACAATTGGATGAATCGACCGATGTCGCATTGTGCTCTCGGCTATTGGTGTTTGCCCGATACATAAC
TGAGGGAGACTTCAAAGACGAGTTTCTTTTTTGTAAGACTCTTGATACCACCACAAAGGCTCAGGATATGATGGAAATTG
TTAACAATTTCTTTGAAGTATGGTCTGGATTGGGTGTCACCACTGATGGTGCACCTGCCATGCTGAGCTCAAGATTGGGC
TTCCAAATGCTGGTGAAACAGCATGCTCCAATGGTAACCGGAGTTCATTGCTTCATTCATAGGGAAGCTTTGGCATCAAA
AACATTGCCTGATCCACTGAACGCCGTTTTCAAAGGGTTAGTAAAAGTCATGAATCACATCAGATCATTGGCTCTGAACA
CCAGGCTGTTCAAAAGATTTTGCCTGGACATGGGTTCCAACTTTGGGAACATACTCATTGAGAGAGAAGTTGGATTTATT
TCTCCAGGCTCAAGGAACATACTCAACAGAGTTTTTCAGTTGAGAGAGAAGTTGGATTTATTTCTCCAGGCTCAAGGGAA
AGAGGAATTCCGAAATGTGCTGACACAGTCAAATTTAGAACTTGCGTATCTTGTCGATATTTTTCGAATCTTGAACAAAC
TGAATCTTCAGCTGCAAGGGAAAGGTGCAAATCTGTTCTCTCACCAAAGCATCGTTAAGGCTTTTCTTGATAAATTGGAA
CTCTGGATTATAAGAGTCGAAGGCAATACGTTGGTTCAATTTCCATATGTGGATGCCATGCTCAGGGAAAAGGAAGCCAT
TCGGACGCAAATTCTCCATCATTTACAGAAGCTACAAGGATACTTTTTGGAGGTGGACAGGACAAGGGATGGATTATCTT
TCATCAGGAATCCATTTACAACAGATGTTAATAGTGTTCCAGAGGATCTGCAGGAAAAATTCTTGGATCTGAAAAATGAT
TTTGCGGCTCAAGACATGTACCAGCAGTCTACCATAGAGAAATTCTGGGCCAGCGTGATCAGAAGTTACCAAAATCTGTC
AGCACACGCAGTCAGATTTCTTTTGCCATTTGCATCAACTTATATGTGTGAGATTGGAATTTCGTGTTTGTTGCACGTTA
CTATTGACGAACGTTCCAGGCCTGTCCTACTGAGAAGATTGAAATGCTCCATTGCA
AGAAATGTCAAGCGCAAGTATTTGGAGGACTACATCAAATTCAGCTTCACTTGTCAAGAAAAAGGCATGGATTTGCCACA
ATGTGTTGTTTCAGTTTTGGGGAATGACTCAATGAAGCCGGCTAAGCTGAAACTCCATCTTGAAAAGTGTCACCCCAACT
TGTTGCAAAAGGATGAAGATTATTTTGAGTGTCTGAAACGGCAGCACTTCGACTCCACAAGTGCATTCTACAATAAGACA
AGCAATGCAGTGCGCGCTTCCTACATTGTTGCATACAAAGTTACACAGGCCAAGAAGCCGCATACCATTGTAGAGCAACT
CGTGCTCCCCTGTGCAAAAGAGATGATGCGGCTTGTTCTTGGTGAGGAAGCAGCAAGGAAGCTGAATGATATATCTGTCT
CTAACGACACACTATCGAGACGGATAAATGAGCTATCACAGAACATCAGTGAACAAGTTGTGGATGAAATAAAGACGTCT
CCATTGTTTACCATACAATTGGATGAATCGACCGATGTCGCATTGTGCTCTCGGCTATTGGTGTTTGCCCGATACATAAC
TGAGGGAGACTTCAAAGACGAGTTTCTTTTTTGTAAGACTCTTGATACCACCACAAAGGCTCAGGATATGATGGAAATTG
TTAACAATTTCTTTGAAGTATGGTCTGGATTGGGTGTCACCACTGATGGTGCACCTGCCATGCTGAGCTCAAGATTGGGC
TTCCAAATGCTGGTGAAACAGCATGCTCCAATGGTAACCGGAGTTCATTGCTTCATTCATAGGGAAGCTTTGGCATCAAA
AACATTGCCTGATCCACTGAACGCCGTTTTCAAAGGGTTAGTAAAAGTCATGAATCACATCAGATCATTGGCTCTGAACA
CCAGGCTGTTCAAAAGATTTTGCCTGGACATGGGTTCCAACTTTGGGAACATACTCATTGAGAGAGAAGTTGGATTTATT
TCTCCAGGCTCAAGGAACATACTCAACAGAGTTTTTCAGTTGAGAGAGAAGTTGGATTTATTTCTCCAGGCTCAAGGGAA
AGAGGAATTCCGAAATGTGCTGACACAGTCAAATTTAGAACTTGCGTATCTTGTCGATATTTTTCGAATCTTGAACAAAC
TGAATCTTCAGCTGCAAGGGAAAGGTGCAAATCTGTTCTCTCACCAAAGCATCGTTAAGGCTTTTCTTGATAAATTGGAA
CTCTGGATTATAAGAGTCGAAGGCAATACGTTGGTTCAATTTCCATATGTGGATGCCATGCTCAGGGAAAAGGAAGCCAT
TCGGACGCAAATTCTCCATCATTTACAGAAGCTACAAGGATACTTTTTGGAGGTGGACAGGACAAGGGATGGATTATCTT
TCATCAGGAATCCATTTACAACAGATGTTAATAGTGTTCCAGAGGATCTGCAGGAAAAATTCTTGGATCTGAAAAATGAT
TTTGCGGCTCAAGACATGTACCAGCAGTCTACCATAGAGAAATTCTGGGCCAGCGTGATCAGAAGTTACCAAAATCTGTC
AGCACACGCAGTCAGATTTCTTTTGCCATTTGCATCAACTTATATGTGTGAGATTGGAATTTCGTGTTTGTTGCACGTTA
CTATTGACGAACGTTCCAGGCCTGTCCTACTGAGAAGATTGAAATGCTCCATTGCA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Pelodiscus sinensis | ENSPSIG00000011044 | within_species_paralog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_psin_29 | 77.64 | 87.14 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_psin_39 | 78.17 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_psin_47 | 76.15 | 91.85 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_psin_59 | 77.30 | 97.46 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_psin_65 | 72.26 | 99.64 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPSIG00000003379 retrocopies