Parental gene: | RCC2, ENSPTRG00000000247 |
| Aliases: | None |
| Description: | Regulator of chromosome condensation 2 [Source:UniProtKB/TrEMBL;Acc:K7ABL4] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 1:17309685..17332062(-) |
>ENSPTRG00000000247
AAACTTGAAGGGTCAAAGTGCAAAGGGCAGCTTTTGATTTTTGGGGCAACCAACTGGGACTTGATTGGTCGAAAAGAAGT
GCCTAAACAGCAAGCTGCTTACCGCAATCTCGGTCAGAATTTGTGGGGGCCCCACAGATATGGGTGCCTGGCTGGGGTCC
GGGTGCGGACAGTGGTCTCGGGCTCGTGTGCTGCACACAGCCTCCTCATCACCACGGAAGGGAAGCTGTGGAGCTGGGGT
CGAAATGAGAAGGGGCAGCTGGGACATGGTGACACCAAGAGAGTAGAAGCCCCTAGACTCATCGAGGGTCTTAGCCACGA
AGTGATTGTGTCTGCAGCATGTGGGCGGAACCACACCTTGGCCTTGACGGAAACGGGCTCCGTGTTTGCGTTTGGGGAAA
ACAAGATGGGGCAGCTGGGCCTTGGCAACCAGACAGACGCTGTTCCCAGCCCCGCGCAGATAATGTACAACGGCCAGCCA
ATTACCAAAATGGCCTGTGGGGCTGAATTCAGTATGATAATGGACTGCAAAGGAAACCTCTATTCCTTTGGGTGCCCTGA
ATATGGTCAGCTGGGACACAACTCAGATGGGAAGTTCATCGCCCGAGCACAGCGGATAGAGTACGACTGTGAACTAGTTC
CCCGGCGAGTGGCCATCTTCATTGAGAAGACGAAAGATGGACAGATTCTGCCTGTACCAAACGTGGTTGTACGAGACGTG
GCCTGTGGCGCTAACCACACGCTGGTCCTGGACTCCCAGAAGCGAGTCTTCTCCTGGGGCTTCGGTGGCTATGGCCGGCT
GGGCCACGCAGAGCAGAAGGATGAGATGGTCCCCCGCCTGGTGAAGCTGTTTGACTTCCCTGGGCGTGGGGCTTCCCAGA
TCTATGCTGGTTACACCTGCTCCTTTGCTGTCAGTGAAGTGGGTGGTCTGTTTTTCTGGGGGGCCACCAACACCTCCCGT
GAATCTACCATGTACCCAAAAGCAGTGCAGGACCTCTGTGGCTGGAGAATCCGGAGCCTGGCTTGTGGGAAGAGCAGCAT
CATTGTGGCCGCCGACGAGAGCACTATCAGCTGGGGTCCGTCACCGACCTTTGGGGAACTGGGCTACGGGGACCACAAGC
CCAAGTCTTCCACTGCAGCCCAGGAGGTGAAGACTCTGGATGGCATTTTCTCAGAGCAGGTCGCCATGGGCTACTCACAC
TCCTTGGTGATAGCAAGAGATGAAAGTGAGACTGAGAAAGAGAAGATCAAGAAACTGCCAGAATACAACCCCCGAACCCT
CTGA
AAACTTGAAGGGTCAAAGTGCAAAGGGCAGCTTTTGATTTTTGGGGCAACCAACTGGGACTTGATTGGTCGAAAAGAAGT
GCCTAAACAGCAAGCTGCTTACCGCAATCTCGGTCAGAATTTGTGGGGGCCCCACAGATATGGGTGCCTGGCTGGGGTCC
GGGTGCGGACAGTGGTCTCGGGCTCGTGTGCTGCACACAGCCTCCTCATCACCACGGAAGGGAAGCTGTGGAGCTGGGGT
CGAAATGAGAAGGGGCAGCTGGGACATGGTGACACCAAGAGAGTAGAAGCCCCTAGACTCATCGAGGGTCTTAGCCACGA
AGTGATTGTGTCTGCAGCATGTGGGCGGAACCACACCTTGGCCTTGACGGAAACGGGCTCCGTGTTTGCGTTTGGGGAAA
ACAAGATGGGGCAGCTGGGCCTTGGCAACCAGACAGACGCTGTTCCCAGCCCCGCGCAGATAATGTACAACGGCCAGCCA
ATTACCAAAATGGCCTGTGGGGCTGAATTCAGTATGATAATGGACTGCAAAGGAAACCTCTATTCCTTTGGGTGCCCTGA
ATATGGTCAGCTGGGACACAACTCAGATGGGAAGTTCATCGCCCGAGCACAGCGGATAGAGTACGACTGTGAACTAGTTC
CCCGGCGAGTGGCCATCTTCATTGAGAAGACGAAAGATGGACAGATTCTGCCTGTACCAAACGTGGTTGTACGAGACGTG
GCCTGTGGCGCTAACCACACGCTGGTCCTGGACTCCCAGAAGCGAGTCTTCTCCTGGGGCTTCGGTGGCTATGGCCGGCT
GGGCCACGCAGAGCAGAAGGATGAGATGGTCCCCCGCCTGGTGAAGCTGTTTGACTTCCCTGGGCGTGGGGCTTCCCAGA
TCTATGCTGGTTACACCTGCTCCTTTGCTGTCAGTGAAGTGGGTGGTCTGTTTTTCTGGGGGGCCACCAACACCTCCCGT
GAATCTACCATGTACCCAAAAGCAGTGCAGGACCTCTGTGGCTGGAGAATCCGGAGCCTGGCTTGTGGGAAGAGCAGCAT
CATTGTGGCCGCCGACGAGAGCACTATCAGCTGGGGTCCGTCACCGACCTTTGGGGAACTGGGCTACGGGGACCACAAGC
CCAAGTCTTCCACTGCAGCCCAGGAGGTGAAGACTCTGGATGGCATTTTCTCAGAGCAGGTCGCCATGGGCTACTCACAC
TCCTTGGTGATAGCAAGAGATGAAAGTGAGACTGAGAAAGAGAAGATCAAGAAACTGCCAGAATACAACCCCCGAACCCT
CTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 42 .93 RPM |
| SRP007412_cerebellum | 36 .67 RPM |
| SRP007412_heart | 11 .08 RPM |
| SRP007412_kidney | 37 .42 RPM |
| SRP007412_liver | 32 .90 RPM |
| SRP007412_testis | 30 .46 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dasypus novemcinctus | ENSDNOG00000001396 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000179051 | ortholog_one2one | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000015263 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000007783 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000014544 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000025834 | ortholog_one2one | 3 retrogenes | |
| Rattus norvegicus | ENSRNOG00000006327 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_1804 | 66.67 | 54.80 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_2072 | 84.77 | 80.80 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ptro_2434 | 81.35 | 99.30 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000000247 retrocopies