Parental gene: | CAP1, ENSPTRG00000000583 |
| Aliases: | None |
| Description: | adenylyl cyclase-associated protein 1 [Source:RefSeq peptide;Acc:NP_001233522] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 1:40326599..40357995(+) |
>ENSPTRG00000000583
ATGGCTGACATGCAAAATCTGGTAGAAAGATTGGAGAGGGCAGTGGGCCGCCTGGAGGCAGTATCTCATACCTCTGACAT
GCACCGTGGGTATGCAGACAGTCCTTCAAAAGCAGGAGCAGCTCCATATGTGCAGGCATTTGACTCGCTGCTTGCTGGTC
CTGTGGCAGAGTACTTGAAGATCAGTAAAGAGATTGGGGGAGACGTGCAGAAACATGCGGAGATGGTCCACACAGGTTTG
AAGTTGGAGCGAGCTCTGTTGGTTACAGCTTCTCAGTGTCAACAGCCAGCAGAAAATAAGCTTTCCGATTTGTTGGCACC
CATCTCAGAGCAGATCAAAGAAGTGATAACCTTTCGGGAGAAGAACCGAGGCAGCAAGTTGTTTAATCACCTGTCAGCTG
TCAGCGAAAGTATCCAGGCCCTGGGCTGGGTGGCTATGGCTCCCAAGCCTGGCCCTTATGTGAAAGAAATGAATGATGCC
GCCATGTTTTATACAAACCGAGTCCTCAAAGAGTACAAAGATGTGGATAAGAAGCATGTAGACTGGGTCAAAGCTTATTT
AAGTATATGGACAGAGCTGCAGGCTTACATTAAGGAGTTCCATACCACCGGACTGGCCTGGAGCAAAACGGGGCCTGTGG
CAAAAGAACTGAGCGGACTGCCATCTGGACCCTCTGCCGGATCAGGTCCTCCTCCCCCTCCACCAGGCCCCCCTCCTCCC
CCAGTCTCTACCAGTTCAGGCTCAGATGAGTCCGCTTCCCGCTCAGCACTGTTCGCGCAGATTAATCAGGGGGAGAGCAT
TACACATGCCCTGAAACATGTATCTGATGACATGAAGACTCACAAGAACCCTGCCCTGAAGGCTCAGAGTGGTCCAGTAC
GCAGTGGCCCCAAACCATTCTCTGCACCTAAACCCCAAACCAGCCCATCCCCCAAACGAGCCACAAAGAAGGAGCCAGCT
GTACTTGAACTGGAGGGCAAGAAGTGGAGAGTGGAAAATCAGGAAAATGTTTCCAACCTGGTGATTGAGGACACAGAGCT
GAAACAGGTGGCTTACATATACAAGTGTGTCAACACGACATTGCAAATCAAGGGCAAAATTAACTCCATTACAGTAGATA
ACTGTAAGAAACTTGGCCTGGTATTCGATGACGTGGTGGGCATTGTGGAGATAATCAACAGTAAGGATGTCAAAGTTCAG
GTAATGGGTAAAGTGCCAACCATATCCATCAACAAAACAGATGGCTGCCATGCTTACCTGAGCAAGAATTCCCTGGATTG
TGAAATAGTCAGTGCCAAATCTTCCGAGATGAACGTCCTCATTCCTACAGAAGGCGGTGACTTTAATGAATTCCCAGTTC
CTGAGCAGTTCAAGACCCTATGGAACGGGCAGAAGTTGGTCACCACAGTGACAGAAATTGCTGGATAA
ATGGCTGACATGCAAAATCTGGTAGAAAGATTGGAGAGGGCAGTGGGCCGCCTGGAGGCAGTATCTCATACCTCTGACAT
GCACCGTGGGTATGCAGACAGTCCTTCAAAAGCAGGAGCAGCTCCATATGTGCAGGCATTTGACTCGCTGCTTGCTGGTC
CTGTGGCAGAGTACTTGAAGATCAGTAAAGAGATTGGGGGAGACGTGCAGAAACATGCGGAGATGGTCCACACAGGTTTG
AAGTTGGAGCGAGCTCTGTTGGTTACAGCTTCTCAGTGTCAACAGCCAGCAGAAAATAAGCTTTCCGATTTGTTGGCACC
CATCTCAGAGCAGATCAAAGAAGTGATAACCTTTCGGGAGAAGAACCGAGGCAGCAAGTTGTTTAATCACCTGTCAGCTG
TCAGCGAAAGTATCCAGGCCCTGGGCTGGGTGGCTATGGCTCCCAAGCCTGGCCCTTATGTGAAAGAAATGAATGATGCC
GCCATGTTTTATACAAACCGAGTCCTCAAAGAGTACAAAGATGTGGATAAGAAGCATGTAGACTGGGTCAAAGCTTATTT
AAGTATATGGACAGAGCTGCAGGCTTACATTAAGGAGTTCCATACCACCGGACTGGCCTGGAGCAAAACGGGGCCTGTGG
CAAAAGAACTGAGCGGACTGCCATCTGGACCCTCTGCCGGATCAGGTCCTCCTCCCCCTCCACCAGGCCCCCCTCCTCCC
CCAGTCTCTACCAGTTCAGGCTCAGATGAGTCCGCTTCCCGCTCAGCACTGTTCGCGCAGATTAATCAGGGGGAGAGCAT
TACACATGCCCTGAAACATGTATCTGATGACATGAAGACTCACAAGAACCCTGCCCTGAAGGCTCAGAGTGGTCCAGTAC
GCAGTGGCCCCAAACCATTCTCTGCACCTAAACCCCAAACCAGCCCATCCCCCAAACGAGCCACAAAGAAGGAGCCAGCT
GTACTTGAACTGGAGGGCAAGAAGTGGAGAGTGGAAAATCAGGAAAATGTTTCCAACCTGGTGATTGAGGACACAGAGCT
GAAACAGGTGGCTTACATATACAAGTGTGTCAACACGACATTGCAAATCAAGGGCAAAATTAACTCCATTACAGTAGATA
ACTGTAAGAAACTTGGCCTGGTATTCGATGACGTGGTGGGCATTGTGGAGATAATCAACAGTAAGGATGTCAAAGTTCAG
GTAATGGGTAAAGTGCCAACCATATCCATCAACAAAACAGATGGCTGCCATGCTTACCTGAGCAAGAATTCCCTGGATTG
TGAAATAGTCAGTGCCAAATCTTCCGAGATGAACGTCCTCATTCCTACAGAAGGCGGTGACTTTAATGAATTCCCAGTTC
CTGAGCAGTTCAAGACCCTATGGAACGGGCAGAAGTTGGTCACCACAGTGACAGAAATTGCTGGATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 104 .37 RPM |
| SRP007412_cerebellum | 100 .95 RPM |
| SRP007412_heart | 53 .31 RPM |
| SRP007412_kidney | 145 .38 RPM |
| SRP007412_liver | 137 .16 RPM |
| SRP007412_testis | 193 .69 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000003012 | possible_ortholog | 2 retrogenes | |
| Homo sapiens | ENSG00000131236 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000027527 | ortholog_one2one | 2 retrogenes | |
| Macropus eugenii | ENSMEUG00000004960 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000028656 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000012077 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000005492 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000001496 | ortholog_one2one | 4 retrogenes | |
| Pan troglodytes | ENSPTRG00000017750 | within_species_paralog | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000013492 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_484 | 88.39 | 64.84 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_1796 | 91.30 | 91.58 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000000583 retrocopies