Parental gene:

FAM35A, ENSPTRG00000002465

Aliases:None
Description:family with sequence similarity 35, member A [Source:HGNC Symbol;Acc:28773]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:10:86570828..86668967(+)


>ENSPTRG00000002465
ATGAGTGGAGGATCTCAAGTCCACATTTTTTGGGGTGCTCCAGTTGCTCCACTGAAAATCACAGTATCAGAAGACACAGC
TTCTTTAATGTCTGTTGCTGACCCCTGGAAAAAAATTCAGCTTTTATACAGTCAACATTCTTTATATCTGAAGGATGAAA
AACAGCACAAAAATCTTGAAAACTATAAAGTCCCAGAATCTATTGGTTCTCCAGATCTTAGTGGTCATTTCTTAGCAAAC
TGTGTGAATAGACATGTTCAGGTGAAAGATGACTTTGTACATTCTGTTTCTGAAACACAGAATATAGAATCCCAGAAGAT
TCACTCCTCTAGACTGAGTGATATAACTAGCTCTAATATGCAAATATGTGGATTTAAAAGCACAGTTCCGCATTTAACCG
AAGAAGAAAAGTATCAAAAGCTTCTCAGTGAAAATAAAATGAGAGATGAACAGCCTAAACATCAGCCAGATATATGTGGT
AAGAACTTTAACACAAATTTGTTTCAGTTGGGCCATAAATGTGCAGCTGTGTTGGATTTGGTTTGTAGTACTGAAAAAAT
TAATATAGGGCCTGAAGTGGTACAAAGAGAGTGTGTGCCAACAGAATATCATGAAATACAAAACCAGTGTTTGGGATTAT
TTTCCTCGAACGCAGTAGATAAGTCAAGGTCTGAAGCAGCAGTTAGGAAGGTCTCAGACCTTAAAATATCAACTGATACA
GAATTTCTCAGTATAATTACCTCCAGCCAGGTTGCTTTTTTAGCTCAAAAGAAAGATAAAAGGCGGAGTCCTGTAAATAA
AGGGAATGTAAACATGGAGACTGAACCAAAGGCAAGTTACGGGGAGATAAGAATACCTGAAGAGAATTCGATTCAGCTTG
ATGGTTTTACAGAAGCATATGAAAGTGGACAAAACCAAGCATATTCCCTTGAACTTTTTAGTCCTCTTTGTCCTAAAACA
GAAAATAGCCGCATTCACATAAACTCTGATAAAGGTCTTGAAGAACATACAGGATCTCAAGAACTTTTCAGTTCTGAAGA
TGAACTGCCACCAAATGAGATACGTATTGAGTTGTGTAGCTCAGGAATACTGTGTTCCCAACTAAATACCTTCCACAAAA
GTGCTATTAAAAGAAGCTGTACCTCTGATGATAAAGTGGGCCAGTCTGAAGCTCTATCTAGAGTCCTTCAAGTAGCTAAG
AAAATGAAGTTGATTTCTAATGGAGGAGATTCTGCTGTAGAAATGGATCGGAGAAATGTGTCTGAATTTAAGAATATTAA
AAAAACATCATTAATAAAAAACTGTGATTCTAAAAGCCAGAAGTATAATTGTTTAGTCATGGTGCTATCTCCATGCCATG
TGAAGGAAATAAACATAAAATTCGGACCAAATTCTGGCTCTAAAGTGCCTTTAGCAACAGTTACAGTAATTGATCAATCA
GAAACTAAGAAGAAGGTTTTTCTGTGGAGGACTGCAGCATTTTGGGCATTTACAGTGTTTCTTGGAGATATAATTTTACT
CACAGATGTTGTTATTCATGAGGACCAATGGATTGGTGAGACAGTACTACAATCAACATTTAGCAGTCAGTTATTAAATC
TTGGGAGTTATTCATCTATTCAGCCTGAAGAATATTCCAGTGTAGTTAGTGATGTTGTACTTCAAGACTTACTGGCATAT
GTGTCCTCAAAACATTCCTACCTCAGAGATCTTCCTCCGAGGCAGCCTCAGAGGGTGAACAGTATAGACTTTGTAGAATT
GGAGCACCTTCAACCTGATGTATTAGTCCACGCAGTACTAAGAGTTGTTGATTTCACTATACTGACAGAGGCAGTATACA
GTTATAGAGGACAGAAGCAGAAAAAAGTTATGTTAACAGTGGAACAGGCCCAAGATCAACATTATGCGCTTGTATTATGG
GGTCCTGGAGCAGCCTGGTACCCTCAACTTCAAAGGAAAAAAGGAGTGGTTCTAATTAAAGCCCAGATTTCAGAGCTGGC
ATTTCCTATTACAGCAGCTCAGAAGATAGCTCTAAATGCTCACAGTTCTCTGAAGAGTATTTTTTCTTCTCTTCCCAACA
TCGTATATACTGGCTGTGCAAAATGTGGATTGGAACTAGAAACAGATGAGAACAGGATCTACAAACAATGTTTTAGCTGC
TTGCCATTTACTATGAAGAAAATATATTATAGGCCAGCGTTAATGACTGCCGTTGATGGAAGACATGATGTTTGCATCCG
TGTAGAATCAAAGCTGATAGAGAAGATTCTTCTCAACATTTCTGCAGACTGCCTCAACAGAGTGATAGTTCCTTCCTCAG
AGATCACCTATGGGATGGTCGTGGCAGACCTGTTCCACTCCTTGTTGGCAGTCAGCGCAGAACCTTGTGTATTGAAGATT
CAGAGCCTTTTTGTGTTAGATGAAAACAGCTATCCGTTACAACAAGATTTCTCCCTCCTGGATTTTTATCCTGACATTGT
AAAGCATGGAGCCAATGCCCGTCTCTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 7 .92 RPM
SRP007412_cerebellum 5 .38 RPM
SRP007412_heart 6 .67 RPM
SRP007412_kidney 24 .84 RPM
SRP007412_liver 12 .86 RPM
SRP007412_testis 4 .64 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000011809 possible_ortholog 1 retrogene
retro_chof_1126,
Dasypus novemcinctus ENSDNOG00000000017 possible_ortholog 1 retrogene
retro_dnov_2237,
Homo sapiens ENSG00000122376 ortholog_one2one 1 retrogene
retro_hsap_1370,
Nomascus leucogenys ENSNLEG00000011652 ortholog_one2one 3 retrogenes
retro_nleu_1073, retro_nleu_2157, retro_nleu_840,
Pongo abelii ENSPPYG00000002828 ortholog_one2one 1 retrogene
retro_pabe_1137,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_941 90.11 67.66
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Download FASTA sequences of all ENSPTRG00000002465 retrocopies