Parental gene: | RIMKLB, ENSPTRG00000004643 |
| Aliases: | None |
| Description: | ribosomal protein S6 modification-like protein B [Source:RefSeq peptide;Acc:NP_001233444] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 12:8924866..9002448(+) |
>ENSPTRG00000004643
ATGTGTAGTTCTGTGGCTGCCAAGTTGTGGTTTTTGACAGATCGTCGCATCAGGGAAGACTATCCTCAAAAAGAGATTTT
ACGAGCATTGAAGGCCAAATGTTGTGAGGAGGAACTGGACTTCAGGGCTGTGGTGATGGATGAGGTGGTGCTGACAATCG
AGCAAGGAAACCTGGGTCTGCGGATCAATGGAGAGCTAATCACTGCCTACCCACAAGTGGTGGTAGTCAGAGTACCAACC
CCTTGGGTGCAAAGTGATAGTGACATCACTGTTTTGCGCCATCTAGAGAAGATGGGATGTCGGTTAATGAACCGACCTCA
AGCCATCCTGAACTGCGTTAATAAGTTCTGGACATTTCAAGAGTTGGCTGGCCATGGTGTTCCTCTGCCAGATACTTTCT
CTTATGGTGGCCACGAAAATTTTGCTAAAATGATTGATGAAGCTGAAGTACTGGAGTTCCCAATGGTAGTAAAGAATACG
CGGGGTCATAGAGGTAAAGCTGTTTTCTTGGCTCGAGATAAGCACCATTTGGCTGATCTAAGCCATCTTATTCGCCATGA
AGCGCCATACCTGTTCCAGAAGTATGTTAAAGAGTCTCATGGACGGGATGTACGTGTCATTGTCGTGGGAGGCCGTGTGG
TTGGCACCATGTTACGTTGTTCAACAGATGGGAGAATGCAAAGCAACTGCTCATTAGGTGGTGTGGGGATGATGTGCTCA
TTGAGTGAACAAGGGAAGCAGCTAGCTATCCAGGTGTCTAATATCCTGGGGATGGATGTGTGTGGCATTGACCTGTTGAT
GAAAGATGACGGCTCCTTCTGCGTCTGTGAGGCCAATGCAAATGTAGGTTTCATCGCCTTTGATAAGGCTTGTAATCTAG
ATGTAGCTGGTATCATAGCAGACTATGCCGCCTCCCTTCTACCCTCTGGCCGGCTCACCCGGCGTATGTCCCTGCTCTCC
GTGGTGTCCACTGCCAGTGAGACTAGTGAGCCGGAGCTGGGTCCCCCAGCCAGCACTGCTGTTGACAACATGAGTGCAAG
TTCCAGCTCTGTTGACAGCGACCCTGAAAGCACGGAGCGAGAGCTGCTCACCAAGCTCCCAGGGGGCCTGTTCAACATGA
ACCAGCTGCTAGCCAATGAAATCAAACTACTGGTGGACTGA
ATGTGTAGTTCTGTGGCTGCCAAGTTGTGGTTTTTGACAGATCGTCGCATCAGGGAAGACTATCCTCAAAAAGAGATTTT
ACGAGCATTGAAGGCCAAATGTTGTGAGGAGGAACTGGACTTCAGGGCTGTGGTGATGGATGAGGTGGTGCTGACAATCG
AGCAAGGAAACCTGGGTCTGCGGATCAATGGAGAGCTAATCACTGCCTACCCACAAGTGGTGGTAGTCAGAGTACCAACC
CCTTGGGTGCAAAGTGATAGTGACATCACTGTTTTGCGCCATCTAGAGAAGATGGGATGTCGGTTAATGAACCGACCTCA
AGCCATCCTGAACTGCGTTAATAAGTTCTGGACATTTCAAGAGTTGGCTGGCCATGGTGTTCCTCTGCCAGATACTTTCT
CTTATGGTGGCCACGAAAATTTTGCTAAAATGATTGATGAAGCTGAAGTACTGGAGTTCCCAATGGTAGTAAAGAATACG
CGGGGTCATAGAGGTAAAGCTGTTTTCTTGGCTCGAGATAAGCACCATTTGGCTGATCTAAGCCATCTTATTCGCCATGA
AGCGCCATACCTGTTCCAGAAGTATGTTAAAGAGTCTCATGGACGGGATGTACGTGTCATTGTCGTGGGAGGCCGTGTGG
TTGGCACCATGTTACGTTGTTCAACAGATGGGAGAATGCAAAGCAACTGCTCATTAGGTGGTGTGGGGATGATGTGCTCA
TTGAGTGAACAAGGGAAGCAGCTAGCTATCCAGGTGTCTAATATCCTGGGGATGGATGTGTGTGGCATTGACCTGTTGAT
GAAAGATGACGGCTCCTTCTGCGTCTGTGAGGCCAATGCAAATGTAGGTTTCATCGCCTTTGATAAGGCTTGTAATCTAG
ATGTAGCTGGTATCATAGCAGACTATGCCGCCTCCCTTCTACCCTCTGGCCGGCTCACCCGGCGTATGTCCCTGCTCTCC
GTGGTGTCCACTGCCAGTGAGACTAGTGAGCCGGAGCTGGGTCCCCCAGCCAGCACTGCTGTTGACAACATGAGTGCAAG
TTCCAGCTCTGTTGACAGCGACCCTGAAAGCACGGAGCGAGAGCTGCTCACCAAGCTCCCAGGGGGCCTGTTCAACATGA
ACCAGCTGCTAGCCAATGAAATCAAACTACTGGTGGACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 25 .99 RPM |
| SRP007412_cerebellum | 54 .96 RPM |
| SRP007412_heart | 14 .28 RPM |
| SRP007412_kidney | 23 .72 RPM |
| SRP007412_liver | 4 .75 RPM |
| SRP007412_testis | 103 .59 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000166532 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000000332 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000013997 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000011440 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000004244 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000023814 | possible_ortholog | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000003996 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_1457 | 95.03 | 83.42 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000004643 retrocopies