Parental gene:

MTHFD1, ENSPTRG00000006435

Aliases:None
Description:methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase [Source:HGNC Symbol;Acc:7432]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:14:63467233..63539569(+)


>ENSPTRG00000006435
ATGCGCCACCGCGTCTGCAGAGGGCGAAGCGGGCAGGGGCGCAGGCGCAGTAGTGTGATCCGCTGGCCAGTCCCTAAGCA
CGTGGGTTGGGTTGTCCTGCTTGGCTGCGGAGGGAGTGGAACCTCGATATTGGTGGTGTCCATCGTGGGCAGCGGACTAA
TAAAGGCCATGGCGCCAGCAGAAATCCTGAACGGGAAGGAGATCTCCGCGCAAATAAGGGCGAGACTGAAAAATCAAGTC
ACTCAGTTGAAGGAGCAAGTACCTGGTTTCACACCACGCCTGGCAATATTACAGGTTGGCAACAGAGATGATTCCAATCT
TTATATAAATGTGAAGCTGAAGGCTGCTGAAGAGATTGGGATCAAAGCCACTCACATTAAGTTACCAAGAACAACCACAG
AATCTGAGGTGATGAAGTACATTACATCTTTGAATGAAGACTCTACTGTACATGGGTTCTTAGTGCAGCTACCTTTAGAT
TCAGAGAATTCCATTAACACTGAAGAAGTGATCAATGCTATTGCACCCGAGAAGGATGTGGATGGATTGACTAGCATCAA
TGCTGGGAAACTTGCTAGAGGTGACCTCAATGACTGTTTCATTCCTTGTACGCCTAAGGGATGCTTGGAACTCATCAAAG
AGACAGTAAATAAAGGTGACATCCTGGTGGTTGCAACTGGTCAGCCTGAAATGGTTAAAGGGGAGTGGATCAAACCTGGG
GCAATAGTCATCGACTGTGGAATCAATTATGTCCCAGATGATAAAAAACCAAATGGGAGAAAAGTTGTGGGTGATGTGGC
ATACGACGAGGCCAAAGAGAGGGCGAGCTTCATCACTCCTGTTCCTGGCGGCGTAGGGCCCATGACAGTTGCAATGCTCA
TGCAGAGCACAGTAGAGAGTGCCAAGCGTTTCCTGGAGAAATTTAAGCCAGGAAAGTGGATGATTCAGTATAACAACCTT
AACCTCAAGACACCTGTTCCAAGTGACATTGATATATCACGATCTTGTAAACCGAAGCCCATTGGTAAGCTGGCTCGAGA
AATTGGTCTGCTGTCTGAAGAGGTAGAATTATATGGTGAAACAAAGGCCAAAGTTCTGCTGTCAGCACTAGAACGCCTGA
AGCACCGGCCTGATGGGAAATACGTGGTGGTGACTGGAATAACTCCAACACCCCTGGGAGAAGGGAAAAGCACAACTACA
ATCGGGCTAGTGCAAGCCCTTGGTGCCCATCTCTACCAGAATGTCTTTGCGTGTGTGCGACAGCCTTCTCAGGGCCCCAC
CTTTGGAATAAAAGGTGGCGCTGCAGGAGGCGGCTACTCCCAGGTCATTCCTATGGAAGAGTTTAATCTCCACCTCACAG
GTGACATCCATGCCATCACTGCAGCTAATAACCTCGTTGCTGCGGCCATTGATGCTCGGATATTTCATGAACTGACCCAG
ACAGACAAGGCTCTCTTTAATCGTTTGGTGCCATCAGTAGATGGAGTGAGAAGGTTCTCTGACATCCAAATCCGAAGGTT
AAAGAGACTAGGCATTGAAAAGACTGACCCTACCACACTGACAGATGAAGAGATAAACAGATTTGCAAGATTGGACATTG
ATCCAGAAACCATAACTTGGCAAAGAGTGTTGGATACCAATGATAGATTCCTGAGGAAGATCACGATTGGACAGGCTCCA
ACGGAGAAGGGTCACACACGGACGGCCCAGTTTGATATCTCTGTGGCCAGTGAAATTATGGCTGTCCTGGCTCTCACCAC
TTCTCTAGAAGACATGAGAGAGAGACTGGGCAAAATGGTGGTGGCATCCAGTAAGAAAGGAGAGCCCGTCAGTGCCGAAG
ATCTGGGGGTGAGTGGTGCACTGACAGTGCTTATGAAGGATGCAATCAAGCCCAATCTCATGCAGACACTGGAGGGCACT
CCAGTGTTTGTCCATGCTGGCCCGTTTGCCAACATCGCACATGGCAATTCCTCCATCATTGCAGACCGGATCGCACTCAA
GCTTGTTGGCCCAGAAGGGTTTGTAGTGACGGAAGCAGGATTTGGAGCAGACATTGGAATGGAAAAGTTTTTTAACATCA
AATGCCGGTATTCCGGCCTCTGCCCCCACGTGGTGGTGCTTGTTGCCACTGTCAGGGCTCTCAAGATGCACGGGGGCGGC
CCCACGGTCACTGCTGGACTGCCTCTTCCCAAGGCTTACATACAGGAGAACCTGGAGCTGGTTGAAAAAGGCTTCAGTAA
CTTGAAGAAACAAATTGAAAATGCCAGAATGTTTGGAATTCCAGTAGTAGTGGCCGTGAATGCATTCAAGACGGATACAG
AGTCTGAGCTGGACCTCATCAGCCGCCTTTCCAGAGAACATGGGGCTTTTGATGCCGTGAAGTGCACTCACTGGGCAGAA
GGGGGCAAGGGTGCCTTAGCCCTGGCTCAGGCCGTCCAGAGAGCAGCACAAGCACCCAGCAGCTTCCAGCTCCTTTATGA
CCTCAAGCTCCCAGTTGAGGATAAAATCAGGATCATTGCACAGAAGATCTATGGAGCAGATGACATTGAATTACTTCCCG
AAGCTCAACACAAAGCTGAAGTCTACACGAAGCAGGGCTTTGGGAATCTCCCCATCTGCATGGCTAAAACACACTTGTCT
TTGTCTCACAACCCAGAGCAAAAAGGTGTCCCTACAGGCTTCATTCTGCCCATTCGCGACATCCGCGCCAGCGTTGGGGC
TGGTTTTCTGTACCCCTTAGTAGGAACGATCACCATCCATCTTCAAGAAGCTACTTTGAAAGTCTGGCCAGTGTCTATTC
AGGCCCACTGGGAGTTAGGAAGTATAAGTAAGCCAAGAGAAGTCAACCCCTGCCCAGAAGATCTGAAACTAATAGTAGGA
GTTTCCCCAGAAGTCATTTTCAGCCTTAATTCTCATCATGTATAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 33 .75 RPM
SRP007412_cerebellum 33 .63 RPM
SRP007412_heart 45 .06 RPM
SRP007412_kidney 147 .16 RPM
SRP007412_liver 288 .72 RPM
SRP007412_testis 10 .01 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000015967 ortholog_one2one 1 retrogene
retro_cfam_300,
Homo sapiens ENSG00000100714 ortholog_one2one 1 retrogene
retro_hsap_4839,
Gorilla gorilla ENSGGOG00000005251 ortholog_one2one 1 retrogene
retro_ggor_3018,
Microcebus murinus ENSMICG00000013011 ortholog_one2one 6 retrogenes
retro_mmur_1069, retro_mmur_1250, retro_mmur_1462, retro_mmur_451, retro_mmur_777, retro_mmur_993,
Macaca mulatta ENSMMUG00000001319 ortholog_one2one 1 retrogene
retro_mmul_2583,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_3223 89.08 65.61
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Download FASTA sequences of all ENSPTRG00000006435 retrocopies