Parental gene:

TNFAIP1, ENSPTRG00000008912

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:17:28738829..28750325(-)


>ENSPTRG00000008912
ATGTCGGGGGACACCTGCCTGTGCCCAGCCTCAGGGGCCAAGCCCAAGCTCAGTGGCCTCAAGGGAGGAGGGTTGGGCAA
CAAGTATGTCCAGCTCAACGTGGGCGGCTCTCTGTACTACACCACTGTGCGGGCCCTGACCCGCCACGACACCATGCTCA
AGGCCATGTTCAGTGGGCGCATGGAGGTGCTGACCGACAAAGAAGGCTGGATCCTCATAGACCGTTGTGGAAAGCACTTT
GGCACCATTTTGAATTACCTCCGAGATGACACCATCACCCTCCCTCAGAACCGGCAAGAAATCAAGGAATTGATGGCTGA
AGCAAAGTATTACCTCATCCAGGGGCTGGTGAATATGTGCCAGAGTGCCCTGCAGGACAAGAAGGACTCCTACCAGCCTG
TGTGCAACATCCCCATCATCACATCCCTAAAGGAGGAGGAGCGGCTCATCGAATCCTCCACCAAGCCCGTGGTGAAGCTG
CTGTACAACAGAAGCAACAACAAGTATTCCTACACCAGCAACTCTGACGACCACCTGCTGAAAAACATCGAGCTGTTTGA
CAAGCTCTCCCTGCGCTTCAACGGCCGCGTGCTCTTCATCAAGGATGTCATTGGTGACGAGATCTGCTGCTGGTCCTTTT
ATGGCCAGGGCCGTAAGCTGGCAGAGGTGTGCTGTACCTCCATCGTGTATGCCACGGAGAAGAAGCAGACCAAGGTGGAA
TTCCCAGAGGCCCGAATCTATGAGGAGACACTCAACGTCCTACTCTATGAGACTCCCCGCGTCCCCGACAACTCCTTGTT
GGAGGCCACAAGCCGTAGCCGCAGCCAGGCTTCCCCCAGTGAAGATGAGGAGACCTTTGAACTGCGGGACCGTGTCCGCC
GCATCCACGTCAAGCGCTACAGCACTTACGATGACCGGCAGCTCGGCCACCAGTCTACCCATCGCGACTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 51 .44 RPM
SRP007412_cerebellum 41 .08 RPM
SRP007412_heart 29 .53 RPM
SRP007412_kidney 48 .59 RPM
SRP007412_liver 65 .86 RPM
SRP007412_testis 31 .30 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000010870 ortholog_one2one 1 retrogene
retro_dnov_1699,
Monodelphis domestica ENSMODG00000019235 ortholog_one2one 1 retrogene
retro_mdom_1565,
Mus musculus ENSMUSG00000017615 ortholog_one2one 2 retrogenes
retro_mmus_3457, retro_mmus_3615,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_3013 68.45 98.42
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Download FASTA sequences of all ENSPTRG00000008912 retrocopies