Parental gene: | ZNF396, ENSPTRG00000009970 |
| Aliases: | None |
| Description: | zinc finger protein 396 [Source:HGNC Symbol;Acc:18824] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 18:31135488..31145790(-) |
>ENSPTRG00000009970
ATGTCTGCAAAATTGGGAAAGTCATCATCACTCCTAACACCAACTTCAGAGGAGTGTAATGGGATTCTGACAGAGAAGAT
GGAAGAGGAAGAGCAGACCTGTGATCCAGACTCTAGCCTCCACTGGAGCAGCAGCTACAGCCCAGAGACCTTCCGCCAGC
AATTCAGGCAGTTTGGCTACCAGGATTCACCTGGGCCCCATGAGGCTCTGAGCCGGCTCCGAGAACTTTGTCATCTCTGG
CTGAGGCCGGAGGTGCACACCAAGGAGCAGATCCTGGAGCTGCTGGTGCTGGAGCAGTTCCTGGCCATCCTCCCAAAAGA
GCTTCAGGCCTGGGTGCAGAAGCATCATCCAGAGAATGGAGAGGAAACTGTGACTATGCTGGAGGATGTGGAGAGAGAGC
TTGATGGACCAAAGCAGATCTTTTTTGGACGAAGGAAGGACATGATTGCAGAGAAGCTAGCACCTTCAGAAATCACTGAG
GAATTGCCAAGTAGCCAGCTCATGCCCGTGAAGAAGCAGCTCCAGGGAGCATCATGGGAGCTTCAGTCCTTAAGACCACA
TGATGAAGACATCAAAACTACAAATGTGAAATCTGCTTCAAGGCAAAAGACTTCTTTAGGCATAGAACTGCATTGCAGTG
TTTCCAATATCCTTCATATGAATGCCTCCCAGAGTTCCACATATAGAGGAACCTATGAACAAGATGGTAGGTTTGAAAAG
AGACAAGGAAACCCTTCTTGGAAAAAACAACAGAAATGTGATGAATGTGGCAAAATCTTTAGTCAGAGCTCAGCCCTTAT
TTTACGTCAGAGAATCCACAGTGGAGAGAAACCTTATGCATGTGACGAGTGTGCAAAGGCATTCAGCCGAAGCGCAATTC
TGATTCAGCATCGACGAACCCATACTGATTCAAAATATGAACATGTGATTGCAGAGGCCCAAAAGAATATGTACTTCAAG
ACTAGGCTGAAGTGTCCCAGGTCACTTTCAGGAGGCAGATAA
ATGTCTGCAAAATTGGGAAAGTCATCATCACTCCTAACACCAACTTCAGAGGAGTGTAATGGGATTCTGACAGAGAAGAT
GGAAGAGGAAGAGCAGACCTGTGATCCAGACTCTAGCCTCCACTGGAGCAGCAGCTACAGCCCAGAGACCTTCCGCCAGC
AATTCAGGCAGTTTGGCTACCAGGATTCACCTGGGCCCCATGAGGCTCTGAGCCGGCTCCGAGAACTTTGTCATCTCTGG
CTGAGGCCGGAGGTGCACACCAAGGAGCAGATCCTGGAGCTGCTGGTGCTGGAGCAGTTCCTGGCCATCCTCCCAAAAGA
GCTTCAGGCCTGGGTGCAGAAGCATCATCCAGAGAATGGAGAGGAAACTGTGACTATGCTGGAGGATGTGGAGAGAGAGC
TTGATGGACCAAAGCAGATCTTTTTTGGACGAAGGAAGGACATGATTGCAGAGAAGCTAGCACCTTCAGAAATCACTGAG
GAATTGCCAAGTAGCCAGCTCATGCCCGTGAAGAAGCAGCTCCAGGGAGCATCATGGGAGCTTCAGTCCTTAAGACCACA
TGATGAAGACATCAAAACTACAAATGTGAAATCTGCTTCAAGGCAAAAGACTTCTTTAGGCATAGAACTGCATTGCAGTG
TTTCCAATATCCTTCATATGAATGCCTCCCAGAGTTCCACATATAGAGGAACCTATGAACAAGATGGTAGGTTTGAAAAG
AGACAAGGAAACCCTTCTTGGAAAAAACAACAGAAATGTGATGAATGTGGCAAAATCTTTAGTCAGAGCTCAGCCCTTAT
TTTACGTCAGAGAATCCACAGTGGAGAGAAACCTTATGCATGTGACGAGTGTGCAAAGGCATTCAGCCGAAGCGCAATTC
TGATTCAGCATCGACGAACCCATACTGATTCAAAATATGAACATGTGATTGCAGAGGCCCAAAAGAATATGTACTTCAAG
ACTAGGCTGAAGTGTCCCAGGTCACTTTCAGGAGGCAGATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 1 .22 RPM |
| SRP007412_cerebellum | 0 .75 RPM |
| SRP007412_heart | 0 .52 RPM |
| SRP007412_kidney | 3 .69 RPM |
| SRP007412_liver | 0 .72 RPM |
| SRP007412_testis | 7 .69 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000186496 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000023692 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000009107 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_1332 | 72.82 | 56.46 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000009970 retrocopies