Parental gene: | RNF181, ENSPTRG00000012138 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 2A:86784225..86786193(+) |
>ENSPTRG00000012138
ATGGCGTCCTATTTCGATGAACACGACTGCGAGCCGTCGGACCCTGAGCAGGAGACGCGAACCAACATGCTGCTGGAGCT
CGCAAGGTCACTTTTCAATAGGATGGACTTTGAAGACTTGGGGTTGGTAGTAGATTGGGACCACCACCTGCCTCCACCAG
CTGCCAAGACTGTGGTTGAGAACCTCCCCAGGACAGTCATCAGAGGCTCTCAGGCTGAGCTCAAGTGCCCCGTGTGTCTT
TTGGAATTTGAGGAGGAGGAGACTGCCATTGAGATGCCTTGCCATCACCTTTTCCATTCCAGCTGCATTCTGCCCTGGCT
AAGCAAGACAAATTCCTGTCCCTTGTGCCGCCATGAGCTGCCCACTGATGACGACACTTATGAGGAGCACAGACGAGATA
AGGCTCGAAAACAGCAGCAGCAACACCGACTGGAGAACCTCCATGGAGCCATGTACACGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 25 .42 RPM |
| SRP007412_cerebellum | 21 .87 RPM |
| SRP007412_heart | 16 .58 RPM |
| SRP007412_kidney | 77 .91 RPM |
| SRP007412_liver | 44 .22 RPM |
| SRP007412_testis | 51 .22 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000019647 | possible_ortholog | 3 retrogenes | |
| Homo sapiens | ENSG00000168894 | ortholog_one2one | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000017824 | ortholog_one2one | 3 retrogenes | |
| Pongo abelii | ENSPPYG00000012225 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_650 | 64.94 | 98.69 | Please wait, loading  |
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| 2. | retro_ptro_2557 | 87.90 | 100.00 | Please wait, loading |
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Download FASTA sequences of all ENSPTRG00000012138 retrocopies